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Detailed information on CNT30369879


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692428Oryza glumipatulaOryza sativa48.7539.5100350forward
CNT30678417Oryza glumipatulaSetaria viridis22.985092.12165forward
CNT30522336Oryza glumipatulaSetaria italica20.7556.2393.96149forward
CNT30524833Oryza glumipatulaPhaseolus vulgaris25.2111.9681.22181forward
CNT30296550Oryza glumipatulaTriticum aestivum27.5847.3789.9198forward
CNT30589135Oryza glumipatulaMusa acuminata16.9931.7786.89122forward
CNT30553163Oryza glumipatulaOryza glaberrima51.6726.98100371forward
CNT30439764Oryza glumipatulaAegilops tauschii25.6339.489.13184forward
CNT30448528Oryza glumipatulaSaccharum spontaneum26.612.3191.62191forward
CNT301613Oryza glumipatulaZea mays37.8847.7291.18272forward
CNT30683907Oryza glumipatulaTriticum urartu44.2948.490.25318forward
CNT30361641Oryza glumipatulaSorghum bicolor28.1317.1694.06202forward
CNT30147849Oryza glumipatulaBrachypodium distachyon28.6946.7193.2206forward
CNT30100699Oryza glumipatulaOryza rufipogon45.5429.7399.69327forward
CNT30575527Oryza glumipatulaOryza barthii31.6235.9799.56227forward
CNT30116295Oryza glumipatulaOryza nivara35.3826.9699.61254forward
CNT30603857Oryza glumipatulaOryza punctata34.5428.5197.58248forward

Expression of CNT30369879

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSTPRRSVLKTVWQTWREMSGRMLKRVRLNSCTAAGTSAPTARGAYPVAHAE*

>peptide 2 (46 aa)
MRVPLLGHTYRSRSCGGFFFFLLRFDSSLRLRARAARRGGVRGALD*

Sequence

>CNT30369879
GAAGCACTCCAGTAATGTAATTTTTTTCCAATAGAGTAAGGTAGGTAAAAATCGAGCACTAATGCTACAGTACTCTCTCAGTCTTGGCAGGTCGCGCCGA
AATATTTTCTAGGCCTGAGAAGAGAAGGGTAAAAATGCAGTAAAATCCGACGCGGTAAAAAAAAAAACAGTAGAGGGATGCGTGTCCCCCTACTGGGCCA
CACGTACCGTAGCCGCAGCTGCGGTGGTTTTTTTTTTTTTCTCCTTCGTTTTGACTCGTCGCTGCGGCTACGCGCACGCGCGGCGCGGCGCGGTGGCGTG
CGGGGGGCGTTGGATTAGTACCGGGCGAGAGCGCGGCGGAGCACCTGGGCGAGGAGGCTGGGGGCGCTGAGGTGGGCCTTGAGGTAGGCGGCGACGGAGG
CCGGGACGGAGACGTCGCGGGTGGTCTGGACGACGACGCAGGGGGCGCGGACCATGCCGAGCACGCCGCGGAGGTCGGTCTTGAAGACGGTCTGGCAGAC
GTGGAGGGAGATGTCCGGGCGCATGTTGAAGAGGGTGCGGCTGAACTCCTGCACCGCCGCCGGCACGTCGGCGCCCACCGCCAGAGGCGCGTACCCCGTC
GCCCACGCCGAGTAGTTCGCCCCCATCGCGTCGAACACCTGCTGTATCTCCTCCAGCTCGAACCCGCCGTGGTAGTCGCTGTCGTTCAAGAACCTGCACA
CACATGTCCGTGCTCCCC