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Detailed information on CNT30369869


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692506Oryza glumipatulaOryza sativa99.68107.9989.39311forward
CNT30223410Oryza glumipatulaHordeum vulgare100101.383.65312forward
CNT30553207Oryza glumipatulaOryza glaberrima100.96100.9697.14315forward
CNT30664085Oryza glumipatulaTriticum dicoccoides42.9543.2390.3134forward
CNT3066721Oryza glumipatulaLeersia perrieri41.0340.8991.41128forward
CNT30361461Oryza glumipatulaSorghum bicolor42.9543.5191.79134forward
CNT30596008Oryza glumipatulaOryza meridionalis101.28102.2791.77316forward
CNT30100969Oryza glumipatulaOryza rufipogon101.28103.6193.67316forward
CNT30575474Oryza glumipatulaOryza barthii101.28100.9696.84316forward
CNT30115932Oryza glumipatulaOryza nivara101.28103.9593.67316forward
CNT30603809Oryza glumipatulaOryza punctata100.32101.9592.01313forward
CNT30550736Oryza glumipatulaOryza brachyantha100.32101.6286.58313forward

Expression of CNT30369869

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MWGHQVVWMVGAEFGLGSMCCLTMLACPFQVE*

>peptide 2 (31 aa)
PSSVARACNPCGGIRWCGWLVLNLGLGPCVV*

Sequence

>CNT30369869
GCCGAGCTCAGTAGCGAGAGCTTGTAACCCATGTGGGGGCATCAGGTGGTGTGGATGGTTGGTGCTGAATTTGGGCTTGGGTCCATGTGTTGTTTAACTA
TGCTGGCTTGCCCGTTCCAAGTTGAGTAGTGGGTGGGAGGGGCTTCGGCGAAAGCCTTGGGGTCTCTCCGGCCCCTGAATGGCAGGCACGGCGTGAGGCT
GGCTTCACAGAGCAGCGATCACTGCTCGCTTCCAACGGTGGAAGGATAACAGGCCGCTGCACCATGGGCCCGCTTCTGGCCCAGAGTTCCACTATTACAG
ACCACCATCTTT