Detailed information on CNT30369801


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003420, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30121467Oryza glumipatulaPhyscomitrium patens21.4613.7390.1191reverse complement
CNT3086845Oryza glumipatulaVigna radiata15.822.4188.0667reverse complement
CNT3067135Oryza glumipatulaLeersia perrieri55.6651.4285.59236reverse complement
CNT30721910Oryza glumipatulaTriticum spelta21.9331.2189.2593reverse complement
CNT3053086Oryza glumipatulaAmborella trichopoda21.4614.3585.7191reverse complement
CNT30101053Oryza glumipatulaOryza rufipogon57.0829.1286.78242reverse complement

Expression of CNT30369801

Peptides detected in this lncRNA

>peptide 1 (55 aa)
KLXEANGGCWRHQERGEEGPNRCQGDQGCRQEEMSLVQVVLSISAFEISSSFSTR*

>peptide 2 (33 aa)
SWXRQTVAVGVIKNVEKKDPTGAKVTKAAAKKK*

>peptide 3 (37 aa)
MRVYILFPLSLFSLDLFAVSAAIGYWIVFLLMKSELFE

Sequence

>CNT30369801
AAGCTGGNTGAGGCAAACGGTGGCTGTTGGCGTCATCAAGAACGTGGAGAAGAAGGACCCAACCGGTGCCAAGGTGACCAAGGCTGCCGCCAAGAAGAAA
TGAGCCTCGTTCAAGTGGTGCTTTCCATATCTGCATTTGAGATATCTAGCTCTTTTAGTACTCGTTAAGTTTTGTCGACGGTCATTTCAGTTGTTGCATT
GACCGTTAATATCTGCTCGCTTTGTGCACTATGTCAGTCGTTTAAAACTCTATTCTGTTCGGTTTAAACTTGGATGTTAAGACTTATTATTGCCCTTAGA
CTGTTGTGGAATGCGAGTGTACATTTTATTTCCTTTGTCTTTATTTTCGCTTGATCTATTCGCTGTTTCTGCTGCTATTGGATACTGGATCGTCTTCCTG
TTAATGAAAAGTGAACTTTTTGAA