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Detailed information on CNT30369796


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30295245Oryza glumipatulaTriticum aestivum31.7527.5882.99147forward
CNT30137084Oryza glumipatulaLolium perenne30.4547.4786.52141forward
CNT30683535Oryza glumipatulaTriticum urartu31.7523.9882.99147forward
CNT30595873Oryza glumipatulaOryza meridionalis58.7560.4497.06272forward
CNT30575883Oryza glumipatulaOryza barthii35.649.41100165forward
CNT30579138Oryza glumipatulaEchinochloa crusgalli28.9412.0593.28134forward

Expression of CNT30369796

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MTVSLGDDETEASFLPLVADVGLLLLDLPELPLDDGGGEVDAGVGGLGVLLGADDAVALGEESDLAPA

>peptide 2 (36 aa)
MRPKPPSFLLWRTSVSFSLIFLSFLLMMEEARSMLA*

Sequence

>CNT30369796
GGAAAAATCATTAATAATATAAATATATCGAAAACAGTTGGTTAAACAGAGTAGTCAAGAGTCGATCGATCGATGTACACGGAGACAAAATCAAAGACCT
CTCTCATCACTTGGATTAATTAATACTAGTAATATTTAGAGACTCTTGGGCAAGCATAGAAATAATTAGCAAATGAGGATGGTGATGCAGGAGGTGTAGA
GGCTAGGCAGCAAGGGAGGGGTGGTGGTGGTCAGAGTTGGGGATGGTCTCCTTGTGGAGATGACCGTCTCCCTTGGGGACGATGAGACCGAAGCCTCCTT
CCTTCCTCTTGTGGCGGACGTCGGTCTCCTTCTCCTTGATCTTCCTGAGCTTCCTCTTGATGATGGAGGAGGCGAGGTCGATGCTGGCGTAGGTGGACTC
GGCGTCCTCCTCGGCGCGGATGACGCCGTGGCGCTTGGTGAAGAGAGTGATCTCGCACCTGCA