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Detailed information on CNT30369755


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 5e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691960Oryza glumipatulaOryza sativa55.9100.8997.07341forward
CNT30678378Oryza glumipatulaSetaria viridis15.5722.5787.3795forward
CNT30187285Oryza glumipatulaSecale cereale15.2525.1488.1793forward
CNT30553103Oryza glumipatulaOryza glaberrima83.1176.1399.61507forward
CNT30105270Oryza glumipatulaOryza longistaminata67.8779.7792.27414forward
CNT30101051Oryza glumipatulaOryza rufipogon83.1177.2997.24507forward
CNT30575905Oryza glumipatulaOryza barthii83.1181.3899.61507forward

Expression of CNT30369755

Peptides detected in this lncRNA

>peptide 1 (29 aa)
SIEYKLINQLCRYTYTRRRMKHALITSWN*

>peptide 2 (85 aa)
MGRLRLMPRMLARRAVQRLQHGCRGGVPSCTFISPFSTFAHTPSFSVSIGHLPPPPPPPLPPPPPPPLPPPPEPPPPLPPPPEPPP

Sequence

>CNT30369755
GATCCATCGAGTACAAATTAATTAATCAATTATGCAGATACACATATACACGTAGACGAATGAAGCATGCTTTAATTACGTCGTGGAACTGAATCATATG
CATGCATATATATCTCATTAATTTACGGGATGAAGGGGAAATTAAGGCACGCAGATACATATGATGATTTGAACAAGGAACAAATTAGACATAGATAGAT
ATATAGTTGTACGTGGCCTGGTGGTCGTTCTTCGTACGTTCTTGTGTGTAGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGG
AAGCCGGAGGGGACGGAGCGGCCGCAGTAGTTGACGAGGAGGCTGAGGTTGATGGGGAGGTTGAGGTTGATGCCAAGGATGTTGGCGCGGAGGGCGGTGC
AGAGGCTGCAACACGGCTGCCGCGGCGGCGTCCCCAGCTGCACGTTTATCAGCCCATTCAGCACGTTCGCGCACACCCCCAGCTTCAGCGTGTCGATCGG
GCATCTTCCTCCTCCCCCGCCGCCTCCGCTTCCTCCTCCTCCGCCGCCTCCGCTTCCTCCACCGCCTGAACCTCCGCCGCCGCTTCCTCCTCCACCTGAA
CCGCCGCCTC