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Detailed information on CNT30369731


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01595|CCDP_MAIZE, E-value = 2e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30392194Oryza glumipatulaTriticum turgidum9.5121.0987.6581forward

Expression of CNT30369731

Peptides detected in this lncRNA

>peptide 1 (95 aa)
MLMPRTLALMAVQRQTAASRMLALMAVQRQTAASRSTRPPSNGQHCSLSGTPIFSFSRLSTLAHTLSFSASIGHLFPPPDGGDGGGVTGGVGVGQ*

Sequence

>CNT30369731
GCTTAATTTGTTAATGAGCAGATAGATAGATAGCACAAGTAGTACGTACGTACACTGGAGGAAACTTTTATTTGACAGTACGCATTAAAATAACAAGATA
CATATATAGATGATCGATCTGATCATCAATAATCACACTGATAGATCGAGATAAGTATATATGTATGACACAACTGCAACACACAGACTAAGCCATGCAA
AGCTTAAGCCTTAATTAGGTAGCTAGGGTTGTGGTGGTAATGAAGATTAAGAATCAGATGAGTGGGCAGGAGAAGTCGGAAGGGCAGGTCTTGTGGCAGT
AGTTGAGGAGGAGGACGAGGTCGACGGGGACGTTGATGTTGATGCCGAGGACGTTGGCCTTGATGGCGGTGCAGAGGCAGACGGCGGCGTCGAGGATGTT
GGCCTTGATGGCGGTGCAGAGGCAGACGGCGGCGTCGAGGTCGACGAGGCCACCCAGCAACGGGCAGCACTGCTCGCTCTCCGGCACGCCGATCTTCAGC
TTCAGCAGGTTGAGCACGTTGGCGCACACGCTCAGCTTCAGCGCGTCGATCGGGCACTTATTCCCTCCACCCGACGGCGGCGACGGAGGCGGCGTCACCG
GCGGCGTCGGTGTGGGGCAGTAGGGCTCGCATGCCTGCACTACTGCACCCATCTGCATGGTGAAGAGCACATTGAGGGCAAGGAACAGCGCACAAACCTG
CACCTTCTTGCCGGCCATCTTAATTAATTAGCTAGCTCTACTACTGCTTAGCAATTAGCTTAATTAGCAGTACTGCCTATAGCTCAGCTCGATCGATCAG
AAGAAGAAGCTGGAGCTGCTTTTTGATATTTGCTAGCTCGATCGGCCGGGAT