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Detailed information on CNT30369704


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SU33|ERLL3_ARATH, E-value = 7e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30365845Oryza glumipatulaSorghum bicolor22.1323.8389.29112forward

Expression of CNT30369704

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MGSSGQHGSAGGTPTLALIRPSTLAHTPSFSASRGHLPNADG

>peptide 2 (35 aa)
MHDRSCVALHAKYVRNVVANKQSSKQIKPRVVKAN*

>peptide 3 (50 aa)
SKLSQTEVHIYLKLQTKALLEVGTGTQASTGPYNKCARTDSVNKSTTKKT*

Sequence

>CNT30369704
AGCAAACTATCACAAACAGAAGTACATATATATCTGAAGTTGCAAACCAAAGCTTTATTAGAAGTTGGTACCGGCACACAAGCTAGCACCGGCCCTTACA
ACAAATGCGCACGTACGGATAGCGTGAATAAGAGTACTACAAAGAAGACATAGGAGAGAGTACAGAGAGAATCCAAACTGGTACCGTGATACGTACAAAC
AGCCAGCATGCACGATCGATCATGCGTTGCGTTGCATGCAAAGTACGTACGTAACGTAGTAGCAAATAAACAGAGCAGCAAGCAAATCAAACCAAGAGTC
GTCAAAGCCAACTAATCACCGTACGTAGGATCAACCCATGCAGGCATTGCATATGCACGCTGCTTAGCACTTGAAGTCGATGGGGAGCAGCGGGCAGCAC
GGCTCCGCCGGAGGCACGCCCACCTTGGCCTTGATCAGGCCCAGCACGTTGGCGCACACGCCCAGCTTCAGCGCGTCGCGGGGGCACCTCCCGAACGCCG
ACGGCG