Detailed information on CNT30369462


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596193Oryza glumipatulaOryza meridionalis100.3933.3396.47255reverse complement
CNT30578099Oryza glumipatulaOryza barthii90.1641.1999.13229reverse complement

Expression of CNT30369462

Peptides detected in this lncRNA

>peptide 1 (73 aa)
PAWGRRDVTKWYQSRLSRFHGRVCRSCAGMVRMAGVDREWLHSMAHALALDTWTWPREDVPGLGLIDGGVDLS*

>peptide 2 (35 aa)
RPGEGGTLQNGIRADSRGFTGACVAVAQAWCAWLV*

>peptide 3 (76 aa)
PGLGKAGRYKMVSEPTLAVSRARVSQLRRHGAHGWCRPGVVTQHGTCAGTGHMDVAKRGRSWPGVDRRGRRSLLRG*

Sequence

>CNT30369462
CCCGGCCTGGGGAAGGCGGGACGTTACAAAATGGTATCAGAGCCGACTCTCGCGGTTTCACGGGCGCGTGTGTCGCAGTTGCGCAGGCATGGTGCGCATG
GCTGGTGTAGACCGGGAGTGGTTACACAGCATGGCACATGCGCTGGCACTGGACACATGGACGTGGCCAAGAGAGGACGTTCCTGGCCTGGGGTTGATCG
ACGGGGGCGTCGATCTCTCTTAAGGGGGTGAGGGTGTAACATCCCGGCCTGGGG