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Detailed information on CNT30369450


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000218, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693123Oryza glumipatulaOryza sativa45.3150.1485.911270forward
CNT30553269Oryza glumipatulaOryza glaberrima45.4271.1694.191273forward
CNT30596548Oryza glumipatulaOryza meridionalis46.5671.6685.291305reverse complement
CNT30107323Oryza glumipatulaOryza longistaminata44.7779.1395.71255forward
CNT30577878Oryza glumipatulaOryza barthii60.0825.1983.371684forward
CNT30117188Oryza glumipatulaOryza nivara30.15100.4893.85845reverse complement

Expression of CNT30369450

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MDFIEIGSSSSLVESIIFWMATCGISSIG*

>peptide 2 (35 aa)
MLLHGKKERRRKMTGGRRRKKRKRKGKTNRWAPAQ*

>peptide 3 (40 aa)
MLLHLKHQAFYFYILCLLQVIVILLKYYLFIHSLLNIIAC*

>peptide 4 (44 aa)
MRIVAGASLFPRPPQHATQLALGLCVILTAPPPLTVVGVTLPPH*

>peptide 5 (50 aa)
MTGVSQPVLSLKTSGTPELLSLVITLRSERMRMRVHGTGATNVSNRKALP*

>peptide 6 (52 aa)
LKLFLSLSCQVRPTPPSVDLLLYSSPSQILAPLTPSPSGEPVFPVFPFSPTP*

>peptide 7 (83 aa)
MKPQPVCYPNSIPTIYPPTTHNQYMKYEPICYPISASTREQVNPSHSSTKAQLRPILATYPLNQLDYLVYPLLSKKLKPTHEI*

>peptide 8 (29 aa)
MTKLMNIGMSWIAGIAYIYCSKVNMNLFE*

Sequence

>CNT30369450
CTTGAAGCTCTTCCTCTCTCTCTCCTGTCAAGTCCGGCCGACGCCGCCATCGGTCGATCTCCTCCTCTATAGTTCCCCTAGCCAAATCCTTGCACCACTG
ACTCCCTCTCCCTCCGGCGAACCCGTTTTTCCCGTTTTCCCCTTCTCCCCCACCCCATAGCAACCACCACAACCACCTCCTTTGCAGCCGAAGAGAAGCT
CTTCTACTTGCCGTTCCGGCCAACTTATCCTCTCTCTCGGCCAGCCACCGACTTCCCCGGGTGCGCGTCGCTCGGGAACACGCTTTTCCGCCGCCGTTGA
GGCCGTTCCGCCATCGGAGCACCGGCGCCCCTTCTCTCTCTCTCTATGCTGTTACACGGGAAGAAGGAGAGAAGGAGGAAGATGACGGGAGGAAGAAGAA
GAAAGAAAAGAAAAAGAAAAGGAAAGACTAACAGGTGGGCCCCTGCACAGTAACATTTTATATTTTCCTTATTTAATTCAAATCCTATTCTTTAAAAGTC
CATATCTCCTAAACCGTAGATCCGATTCCAGTAAAACTTGGACCTAAATTCAAACCCCATCTTTTGACCCCAAATTTGCTATTTTAATATTTTATTTGAA
TTTATTCAAATACTGTTTGAATTTATGTTTGTCTTTTCAAATATTTCTTTTTAACCCAAAATACCCTTTAGCCACTAAAAAGTTGCCGGTTGGAACTTTA
CGCCTTCCATGGGGACGTTCGCGGTTTACTATCCCCGACGTCGGACCGTTGGTTGTAAAGCCCGGCAAAACCAAACCTAAGGTCGAAGTGCTGTTCCTGG
CACCCCACGCCTCGATGCGTATAGTGGCCGGAGCTTCACTATTCCCTCGACCTCCACAGCACGCCACACAGTTAGCTCTTGGGCTCTGTGTGATCCTAAC
CGCTCCGCCGCCACTCACGGTTGTCGGAGTAACACTTCCGCCCCACTAAACCCACACAAACTTCCTATCTCTCTAGCCGTTATGCTGTCAGTTGACACTG
GCTAGAGAAGATACCAATTCTAGTCGTTATACTGCCCAACTCTAGCAACGACTAGCAAACACCCAAATCCCAGCCGATATTCATCCTACCTCGATATCGG
CTTAATCAAATGAAACCCCAGCCAGTCTGCTATCCAAACTCCATACCAACCATTTACCCTCCAACTACCCATAACCAATACATGAAATACGAGCCGATAT
GCTATCCTATTTCAGCATCGACTCGAGAACAAGTAAATCCTAGCCATTCTTCTACCAAAGCCCAACTTCGACCAATACTAGCCACATATCCACTTAACCA
ATTAGATTATTTAGTATATCCCCTACTCTCCAAGAAACTAAAACCCACACATGAAATATAAGTGACAATTGTTACTTAATCCCCTCTAGCCTCCAACCCT
CTAGAACCAACACATAAAGTATTAGCCCATAATCCCTATACCCTATAAAGAAGATAGCTTATACCCGAAACCCTAGCTCTCTTAGCCGCTTATCGATCTT
TTGCTATTTTATGGATTTTATTGAAATTGGCTCTTCCTCTTCTCTAGTAGAGTCTATTATATTCTGGATGGCAACCTGTGGTATTTCTAGCATCGGATAA
TCAGGTTGCCTATCTCGGATTTATTTGCGTTGGAGCAAGGCAAGCTATTATTCCTCCCTTTGAGCATAATTACCCTATATTCTATATCTCTATTCTATGC
ATTAGTCATTCATGATTTTGAATGCATAACCTGAACATATAGCAAACCAGACATATGCTAGCTTTGCTTAGCCCTACCTAGTTAGTCTGTATAAAAATAT
AATGAACTTAGATTGGGACAGTACGTAGGAATTGATTGATTTCCGGGTGGCTAGTACTGTCTCGGTCGATATAGTTATTACCAAGTACTTATGTCGAACG
AACGAGTACGACCGCAATTCTAGAATGGGGACAGACCTTGCAAAGTAAGTTATCTAGCAAAGGTGGTACCTTTGTACAATGGTTCTTATTTAAGTCCTCG
CGCAGGAGGCAAACTTATGCCGCGAAGGGCAAATATAACATTTACCGAGGTGCAGGTAAATGATTTGTTGAGCTCAAGTGTGTGTATATTGTGAAAACCT
GGTTGAGATGACGGGGGTCTCTCAACCAGTTCTCTCTCTAAAAACCTCGGGAACGCCAGAACTCCTCTCGCTGGTGATAACATTACGTTCAGAGCGCATG
AGGATGAGAGTTCATGGAACAGGTGCCACTAATGTTAGTAACCGAAAAGCTTTGCCATGACTAAGCTAATGAATATTGGCATGTCATGGATTGCGGGTAT
AGCGTACATTTACTGCAGTAAAGTAAACATGAATCTATTCGAATAGCCGTGCTCACGGAATTGAGTATCGGGACTCATATGGTGCTTTGGTTAGAAACTT
AGTTCAAGATTTTACTAAATGTTGCTGCATTTAAAGCATCAGGCTTTCTATTTCTATATTCTCTGCCTTCTGCAAGTAATCGTAATCCTACTCAAATATT
ACCTTTTCATACATTCATTATTGAATATAATAGCTTGCTGAGTACGTTGTACTCATCCTTGCTTCAACCCCCTTTTTCCAAAGTTAAATTGAAGTTCTTG
CCGAAGCTAGGAGTTCAATCATATAAGTTAGTCTTATTTGAACCTAGTTCTCAAATCTAGATTAGTTAGATGGTTTAAGTCTATAGCAAAACATTAGAGT
TCAGTCATTCTATAGCTTCTGCTGTAATAGTTAGCCACAATCTTGTAAATTCCCCTATTATTTTATGTAATAACATCTCCTTTGGAGCCTTGTTTAAATG
TAC