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Detailed information on CNT30369328


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523073Oryza glumipatulaSetaria italica24.0118.6985.07134forward
CNT30574579Oryza glumipatulaOryza barthii39.6146.53100221forward

Expression of CNT30369328

Peptides detected in this lncRNA

>peptide 1 (29 aa)
GQALLYSGHEFIFHTPPSPFVVIAQRRRC*

>peptide 2 (31 aa)
TSFIIFRSRIYFSYTPLSVRSDRTEKKVLIS*

Sequence

>CNT30369328
GGACAAGCTTTATTATATTCAGGTCACGAATTTATTTTTCATACACCCCCCTCTCCGTTCGTAGTGATCGCACAGAGAAGAAGGTGCTAATTAGCTAAGC
TCCGTGTACGCACGTACACACGCACGCACGATATACACCAGGTTCGATCAGTCGGACTTGAGCAGGAAGCTCTGCTTGCGCTCGCGGAACTCGCCGGTGC
AGGTGTTGAAGTCCTCCTCCACCTTGGTCTCGCGCACCATCAGGTAGTCGTTGCCGTGGTTGTGGTTGTGGTTGTGGTTGTGGTTGTGGTTGTGGTGGTG
GCGGCCGGAGCCGGACCTGTCGATCTCCTGGAACGTCTCCTTGACGACGTGCTGCTGCTGCACGCCGCCGCGGCCGAGGAAGCCGCCGGTGGGGGTCACC
GACCTCACCTCCTCCGAGCAGTAGTCCACCTCCTGGTAGTGAGCCATTGTTTTTTAGTTGGGGAGTGAGGTGAGGTGGTGTTGTGATGAGCGAGAGATGG
TTAATTAGGGTTTTGGTGGTGTACGGGATGGTAGGGTTAGTGTAGGGGGCGGTTTTAT