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Detailed information on CNT30369295


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690487Oryza glumipatulaOryza sativa16.6121.3899.47189forward
CNT3099524Oryza glumipatulaOryza rufipogon80.5849.3398.8917forward

Expression of CNT30369295

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MNQDSIDNAATKSDKSVMPEGNVIPMDSATEV*

>peptide 2 (38 aa)
RIFLQATRYGPMKRTKEGITEIVQPGVLCTPWFDGDIS*

Sequence

>CNT30369295
AGGATTTTCTTGCAAGCCACTAGATACGGACCCATGAAACGGACGAAGGAGGGCATTACTGAAATAGTGCAGCCAGGAGTACTCTGCACACCGTGGTTTG
ATGGAGATATATCATAGCAACAACTGAACAAGGATTGGTTGTCAACTGGCTCTCCTGCAGTTCCAGGATGAACCAGGACAGTATCGATAATGCAGCCACA
AAATCTGACAAGTCAGTAATGCCAGAAGGGAATGTGATTCCTATGGACTCAGCGACTGAAGTATAATATGGTCTGACGTGTTTACTTCTATGGCCTCATG
AGTCACTTGATACTGTTGGTAGGTAATCTTTTCTGTTTCAGTTTGTGTTTATTCCTCAGAAAATATTCTTAAGGATTGATATCAAGTGCGTATGAACTAG
CATGTGTACTGGTCCGTTTACCAACTCTAGCAACTCGAAGTTCTTTAATTTTTCCTTTTTGTTATTTGTGACGATGCTGAGCTAAATATGTTGATGGAGG
ATTTTTCTTCTCTATGTTATCCAAATTGTGTTTCTTGGGTAAATATCGTGAAAAATCTTAACAGTATATGAGATTGTTACATATAAAAACTGGCTGGTTA
TGCTTGTTTAAAAATAAAAAGCTGGCTATTTATTAATTGGTGCAAAATACTCAGGCCGTTATTATGTGTGCAATCTTTTGTGTGTAACATTATATCACCG
TACTTCTCATGAAAACTTTTGGCCAATTTTATTTCATCGTTTGCTTTCTGGTCCTTTTTGTAGCAATGCTCTAGTGTCCTGTATACCTGAAAATATCTCT
GAGAAGTTCCAGATTTTATTATCAAATATCAAATTATCCAACTGATGCCCGTCGAACAAATATAGTTCTATCTTCATTTCACTAAGTATTGGGACATTTT
TATTGGAATTGTATGGAAGGAATAATGACTTAATGTGCGAGAAAGCTAGCTAGTAAGCTTCCTAGATGGTTGCTAGGAGCAGACTACTGGCCTGCAAAAA
TAATTTTGCAGTATATCTCATGTAAGATTGATGATGCGAGAGCAGCACTCTAGTACTGTATGACTAAATCATAGTAGCTATGGAAAATAGAAAAGTAGTT
CAGGAAATAAAACTAGGGTGATAGGATTGGATTTTGAG