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Detailed information on CNT30369293


BLAST search results

BLAST vs Swiss-Prot:
sp|P12331|CB22_ORYSJ, E-value = 1e-129

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186674Oryza glumipatulaSecale cereale58.9459.6490.13557forward
CNT30298862Oryza glumipatulaTriticum aestivum58.9455.3790.48557forward
CNT30394891Oryza glumipatulaTriticum turgidum53.7656.0790.75508forward
CNT30251387Oryza glumipatulaAvena sativa56.351.289.1532forward
CNT30666046Oryza glumipatulaTriticum dicoccoides58.9460.6190.31557forward
CNT30472898Oryza glumipatulaSaccharum spontaneum56.5154.6691.95534forward
CNT3010541Oryza glumipatulaZea mays49.8458.8892.36471forward
CNT30684601Oryza glumipatulaTriticum urartu55.7754.8489.94527forward
CNT30345513Oryza glumipatulaEragrostis tef56.357.3390.41532forward
CNT3099595Oryza glumipatulaOryza rufipogon79.6887.0598.67753forward
CNT30603457Oryza glumipatulaOryza punctata58.9458.0893.9557forward
CNT30556644Oryza glumipatulaPanicum hallii52.3857.7691.31495forward

Expression of CNT30369293

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRYPSTAPMSTTCTAQIARMLCAWIKLGLPR*

>peptide 2 (32 aa)
MRGHGSTAAAALTCRGRSWWSARPSGSKLPPG*

>peptide 3 (74 aa)
FIINSQHHISLIRFRTCTEIHTTGTDLTLSPILVHPSTRSTRIRTSIRYTYVHLLHRVHTRTLSCRDAHRRQPS*

>peptide 4 (46 aa)
MVMRPSPNTFAAALPASAGEERAMVAAAMSTSLAASSSAAAAAGVCV

>peptide 5 (50 aa)
MAARRRRRSLAGDEVGGRRGRAGRSCRRGRAGRRPRRAARRRCGTPRRRP*

Sequence

>CNT30369293
TTTTATAATTAATTCACAACACCATATTTCATTGATCAGGTTCAGAACCTGCACAGAAATACACACTACCGGTACAGATCTCACCCTCTCTCCAATACTC
GTACATCCATCCACGCGGTCCACACGAATACGTACATCTATACGGTACACGTACGTACATCTACTGCACCGCGTACACACACGCACACTCTCCTGCAGAG
ACGCGCATCGTCGTCAACCTAGCTAGCTTAGCTGAAGGCGATGCGTGGCCATGGCAGCACGGCGGCGGCGGCGCTCACTTGCCGGGGACGAAGTTGGTGG
TCGGCGAGGCCGAGCGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCGACGACCTCGCCGAGCGGCCCGCCGGCGATGCGGTACCCCTCGACGGCGCCCA
TGAGCACCACCTGCACCGCCCAGATCGCCAGGATGCTCTGCGCGTGGATCAAGCTCGGGTTGCCGAGGTAGTCGAGCCCGCCCTCGCTGAAGATCTGCGA
CCCCGCCTTGAACCACACCGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGGAGCTCCGGGAACACGCAGCCCAGCGCGCCGAGCATCGCCCACCTGGAG
TGGATCACCTCCAGCTCCCGGTTCTTGGCGAACGTCTCCGGGTCGGCGGAGAGCCCCGCGGTGTCCCACCCGTAGTCGCCGGGGAACTCGCCGGTCAGGT
AGCTCGGCGGCTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGCGCCGTACCACGGGCTCCCCGACGCGGCGGGCTTGGGCTTCGCCGCCGACTT
GCGCATGGTGATGCGCCCCTCGCCGAACACCTTCGCGGCGGCCTTGCCGGCCAGCGCCGGGGAGGAGAGGGCCATGGTGGCGGCGGCCATGTCTACCTCG
CTTGCTGCTTCAAGCTCAGCTGCTGCTGCTGCTGGGGTGTGTGTG