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Detailed information on CNT30369272


BLAST search results

BLAST vs Swiss-Prot:
sp|O82451|GSTF2_ORYSJ, E-value = 4e-57

BLAST vs NONCODE:
NONORUT000545, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675402Oryza glumipatulaSetaria viridis14.7223.6693.5593forward
CNT30293056Oryza glumipatulaTriticum aestivum9.9721.3690.4863forward
CNT3014272Oryza glumipatulaZea mays14.5625.2184.7892forward
CNT30681876Oryza glumipatulaTriticum urartu25.1616.2984.28159forward
CNT30363688Oryza glumipatulaSorghum bicolor40.5140.782.42256forward
CNT3099627Oryza glumipatulaOryza rufipogon44.9459.1799.3284forward
CNT30497720Oryza glumipatulaDigitaria exilis24.5325.1280155forward
CNT30594623Oryza glumipatulaEragrostis curvula37.3486.7683.47236forward

Expression of CNT30369272

Peptides detected in this lncRNA

>peptide 1 (35 aa)
SRIYYKVLKSEGQSTRMLIAVQDLGWIICSITTQS*

Sequence

>CNT30369272
AAAGCAGAATTTATTATAAGGTTCTCAAGAGCGAAGGCCAGAGCACAAGAATGCTCATAGCAGTACAAGACTTAGGTTGGATCATATGCAGCATAACAAC
ACAATCCTGATTGCTTGAACATTCAACATACAGGACACACATAATAACACAAATCCTTAAACGAGCAACCAACTGGGCACACCTCAGCTTATTCTGTTGA
CCATGGACGACAAACCTGTGCCTAGAACAACTACCTTAAGCAGGAGGCTTCATCAGTGAAGCCACCTTCTGGGAAGACGGCCTTGCCATCAGGTCAGTCC
ACCAGGCCTTCACATGCGGGTATGCGTCCAACACGGATGCGTGGGGAGTAGCCCCCAAGCACACAGTGCCAGCCACATGGCTTAGGTCCGCGACACTGAT
GTAGTCTCCAGCCAGGTACTTGCACTTCGTCAGGCGCGCCTCGTACACCTCCAACACCTTCTTCAGCTTCTCAAGGTTCTCCTCAACAACTTTCTCGTCG
GGGGGTGCCCCAAACATCATCGGACGGATTAGGAGTGTACTGGTTGGACTCCACTTCAAGCCACACATCCACCATTGCTGACTCCTTGAGGTCGCCATCC
TTCAACAGCTCTGGTTTGTTCTTGCGGCATAC