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Detailed information on CNT30369233


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690610Oryza glumipatulaOryza sativa10036.5799.34305forward
CNT30185545Oryza glumipatulaSecale cereale30.4945.3788.1793forward
CNT30455311Oryza glumipatulaSaccharum spontaneum23.936.5293.1573reverse complement
CNT30353440Oryza glumipatulaEragrostis tef35.748.3385.32109reverse complement
CNT30595519Oryza glumipatulaOryza meridionalis66.89100100204forward
CNT3099654Oryza glumipatulaOryza rufipogon10071.699.34305forward
CNT30574824Oryza glumipatulaOryza barthii68.52100100209forward
CNT30497582Oryza glumipatulaDigitaria exilis67.8799.0489.86207forward
CNT30603436Oryza glumipatulaOryza punctata66.8980.6396.57204forward
CNT30550503Oryza glumipatulaOryza brachyantha66.8943.9794.12204forward

Expression of CNT30369233

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MNLIDNMIWSCVQSSFPQPKKMSTSIYFV*

Sequence

>CNT30369233
AACCCAAGTTCCACAGTTGTGATCACAATGCAAACGATACGACAGATAAAGAAAGAACAGCATAACAAGACATATAACTGAGATAAACTTGCAGCTCATT
ACCTCATAATGAATTTGATTGATAATATGATCTGGTCGTGTGTCCAAAGTTCCTTTCCTCAACCAAAAAAAATGAGCACCTCTATCTATTTTGTGTAGTC
CTGCTAGCCTGAGGACACAGCCTCCTGCCTCAAGAACAACATTCTCTGCTTTTAGAAGGACATCAGTACGAGGGCTTCTGCCAATTGGCACAGATGGGCA
ATCCT