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Detailed information on CNT30369221


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 8e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30187050Oryza glumipatulaSecale cereale47.9135.3188.47321forward
CNT30297854Oryza glumipatulaTriticum aestivum40.931.3992.34274forward
CNT30552325Oryza glumipatulaOryza glaberrima69.8550.1699.57468forward
CNT30439990Oryza glumipatulaAegilops tauschii42.2436.7191.52283forward
CNT30664789Oryza glumipatulaTriticum dicoccoides57.1642.4191.38383forward
CNT30685649Oryza glumipatulaTriticum urartu58.9642.0788.86395forward
CNT30574779Oryza glumipatulaOryza barthii57.0147.3999.21382forward

Expression of CNT30369221

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKAMDLTAVARRRSTLTCRGRSWWRRPMRCC*

>peptide 2 (63 aa)
MRYPSTAPMSTTWQPQIARMLCAWIRLGLPSRARPAWPTGSGSPPAPGSWRTSPGRPTARRCPS

Sequence

>CNT30369221
TTTTGCATGTGATTATTTGAGTCCGCGTACATTTCCATGTACCATGGGGTATTCCATTCCATACCGCCAGGCAAACTGATTTCCCAGGAACAAATCAGAT
AAAAATTATTTTACACAATCAGGTCCATTGTACTTCTTTCATCAACCAACCAGATAACATTGTTTTACACAATCTGAACGAACGAAGCAAATATTCGGGT
ACGCGGAAAGAGGAGAACGTCGCGCGTCTCACCGCAGCCTGCATGAAAGCAATGGACCTCACCGCCGTTGCTCGCCGGAGATCCACACTCACTTGCCGGG
GACGAAGTTGGTGGCGTAGGCCCATGCGTTGTTGTTGACGGGGTCGGCCAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCGAACGCCTCGGGG
TCGTCGGCGAGGCCGAGCGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCGACGACCTCGCCGAGCGGGCCGCCGGCGATGCGGTACCCCTCGACGGCGC
CCATGAGCACAACCTGGCAACCCCAGATCGCCAGGATGCTCTGCGCGTGGATCAGGCTGGGGTTGCCGAGCCGAGCGCGCCCAGCATGGCCCACCGGCAG
TGGATCACCTCCAGCTCCCGGTTCTTGGCGAACGTCTCCGGGTCGGCCGACAGCCCGGCGGTGTCCCAGC