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Detailed information on CNT30369190


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30574891Oryza glumipatulaOryza barthii91.17100.7598.7537forward
CNT30115791Oryza glumipatulaOryza nivara86.25100.499.21508forward

Expression of CNT30369190

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MECVKCELHTCTKKGILSSYPITSGTSMLCWYLKSFLLFRFLYT*

Sequence

>CNT30369190
TCATGGCAGCACAAATTCCTAAAGCAAACTTGAAATGCAAAGACTCAATGGAATGAAATAAACTAAAAAAGAATTTACCATTCATCACTTGTTTCTTCTT
GGGTACATCCTGCTCTCTCTATATACATCATACATGCCTATCTGAATAAAGCTGCAATTTTGGGATGAATACAAAATATAAAAAGAGGACAGACTGTACA
TATGGAGTGTGTGAAGTGTGAACTACATACATGCACTAAAAAAGGTATTCTTTCAAGCTATCCCATCACTTCTGGCACATCTATGCTTTGCTGGTATTTA
AAATCTTTTTTACTCTTCCGTTTCCTGTATACTTGAATAAATAATCAACTGGAGATGCAGATCTCAGACGATAATAAATGGACCTGCCCCTCCTGCTTCC
TTTTCTATGAATGATGGCTGCATACACACACTGTTAATCTAGGAAAATTATCTGTGGGCTGTCCCTGTCCATTACCAGTGTAATTCTTTGTTAGAAGATT
TTGTGTTTGTATATCCATGCTACATCAGGGAAGTGGTTGGAACTTTTGAAGACAATAATATCACATCCTCTTCATAACAAATCAGCGTC