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Detailed information on CNT30369171


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690016Oryza glumipatulaOryza sativa97.9710099.66580forward
CNT30552290Oryza glumipatulaOryza glaberrima10085.0699.66592forward
CNT30595586Oryza glumipatulaOryza meridionalis79.2210095.52469forward
CNT3099731Oryza glumipatulaOryza rufipogon10059.5699.49592forward
CNT30603526Oryza glumipatulaOryza punctata98.8210093.33585forward

Expression of CNT30369171

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MQLLQWLPELARLKWKSEIRVEVYRGRKPILRQQPMGLPVDFAEH*

Sequence

>CNT30369171
CTGTGAGGTTTCTTTGGAGACAGGGGTCTTCACCTCTTCAGCATTTAAACTACACTGATCCATCATAAGCGGGTAACTTTGTGGAATCAAAGCATTTGGT
GGCGAAGTTGGCAACATTGACTGATTAGTTCCTTTAGCAAGACTCTCACTTGGAGGGAATGCAGCTATTGCAGTGGCTACCTGAGCTTGCACGTTTGAAA
TGGAAGTCGGAGATACGTGTTGAGGTGTATCGAGGAAGAAAGCCCATCCTTCGTCAGCAACCAATGGGGCTGCCTGTTGACTTTGCTGAACACTAGTCGT
AGGTGGCAGTTGTTGGTCAAAGCCAGCAAATAAATCTATTGACGGAGGGGTAGAGGAAATTGAAGGTTCCTGCAAAGGCGACAGACTCAAGAGATCATGA
TGGACAGGATGAGATGTAGAGGGTGCTTCGGCTTGAACAGGTGGTGAAGATGCCACGGCTTTCTGAACCACAACGTCATGCAGAGTTTCTTTAGGAACAG
AATGGCTGCCTACATCAACTGCTCTATGGGGAACTGATGGAGCCTGTTGGTTAAAGCCAGCAAAAAGATCTATTGGTGCTGCAGAATTGACC