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Detailed information on CNT30369025


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3048148Sorghum bicolorPrunus dulcis100.4585.6694.891350forward
CNT30705843Sorghum bicolorPrunus avium100.2286.5794.281347forward
CNT30117075Sorghum bicolorOryza nivara88.999799.581196forward

Expression of CNT30369025

Peptides detected in this lncRNA

>peptide 1 (30 aa)
LHRTIQSVGATGGVYKGQGRSQRELMTRAY*

>peptide 2 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

>peptide 3 (30 aa)
MMCRRHEGRAIRQVIMNHRISEQSPRQPFI*

>peptide 4 (53 aa)
MMLSHANVSRAMACFEHSNFFKVTAPEARPGQLRPGAHRRQKGPTTSFLTATT*

>peptide 5 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

Sequence

>CNT30369025
CACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATT
CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATTACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATA
CATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGA
AGCTAGCTGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTCCACGCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATA
CTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGA
CTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATAAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAAT
CCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCT
ATGATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGACCCGGCCAATTAA
GGCCAGGAGCGCATCGCCGGCAGAAGGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGG
CACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAACGCGCCCGGTATTGTTATTTATTGTCAC
TACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTC
TCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGTGTCGCCGGCACGAGGGCCGTGCGAT
CCGTCAAGTTATCATGAATCATCGGATCAGCGAGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCGGAAGTCGGGGTTTGTTGCACGT
ATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCAT