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Detailed information on CNT30368820


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522713Sorghum bicolorSetaria italica57.8782.2184.26305forward
CNT30681999Sorghum bicolorTriticum urartu58.2596.5481.76307forward
CNT30722532Sorghum bicolorTriticum spelta56.3643.1788.55297forward

Expression of CNT30368820

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MEFCHSNITSISNTTHLVVPNITTTRTSIDSY*

Sequence

>CNT30368820
TGATGCATAAGGCATAGCAACAATCAGTTAAGCTACCTTCCACCTCATGGTAATAACAACTTGGGGACAACCATAATACAAAAGGAAATGGAGTTTTGTC
ACAGCAACATCACATCCATAAGCAATACCACCCATCTAGTAGTACCTAACATCACCACCACACGCACCTCAATCGACTCATACTGACTAACAGCGATACA
AGGGATATCTTCAGCCCAATGGGTGGGATGTCGCACACGCTCGACTTCACATTGTTGGGGATCCACTCCACAAAGTAGGAAGAGTTCTTGTTCTGAACGT
TCAGCATCTGTTCATCCACTTCCTTGGTGCTCATCTTCCCACGGAACATAGCAGACGCTGTGAGGTAGCGGCCGTGGCGAGGGTCAGTGGAGCAAATCCA
ACCATGAAGAAGTGGAGACGCGGGAAGGGGATCAGGTTCACAGCAAGCTTCCGGAGGTCAGAGTTGAGCTGACCAGGGAAGCGAAGGCAGCACGTAACAC
CACTCATGGTTGCAGAGATGAGGTGGT