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Detailed information on CNT30368649


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 5e-53

BLAST vs NONCODE:
NONBRAT001321, E-value = 1e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697930Sorghum bicolorOryza sativa55.7153.6781.62234forward
CNT30674990Sorghum bicolorSetaria viridis30.2431.8392.91127forward
CNT30519871Sorghum bicolorSetaria italica50.2431.8793.84211forward
CNT30315797Sorghum bicolorCorylus avellana57.6236.6180.99242forward
CNT30547549Sorghum bicolorIpomoea triloba55.4830.179.83233forward
CNT30698248Sorghum bicolorQuercus lobata53.130.5584.75223forward
CNT30267640Sorghum bicolorChenopodium quinoa42.1424.3881.92177forward
CNT3069241Sorghum bicolorQuercus suber52.385084.55220forward
CNT30380641Sorghum bicolorManihot esculenta49.2929.9679.71207forward
CNT30200358Sorghum bicolorPisum sativum53.135.8580.72223forward
CNT30709007Sorghum bicolorGlycine max44.0577.7385.95185forward
CNT3048083Sorghum bicolorPrunus dulcis58.3334.981.63245forward
CNT30177168Sorghum bicolorSecale cereale59.0533.3893.15248forward
CNT30283601Sorghum bicolorTriticum aestivum59.2938.692.37249forward
CNT30219843Sorghum bicolorHordeum vulgare44.7632.7592.02188forward
CNT30398097Sorghum bicolorTriticum turgidum58.8132.2992.31247forward
CNT30565750Sorghum bicolorActinidia chinensis55.4821.284.98233forward
CNT30591253Sorghum bicolorMusa acuminata24.0532.3787.13101forward
CNT3084857Sorghum bicolorVigna radiata48.5716.6182.84204forward
CNT30441386Sorghum bicolorAegilops tauschii58.5751.2596.75246forward
CNT30254117Sorghum bicolorAvena sativa6046.7593.65252forward
CNT30655661Sorghum bicolorTriticum dicoccoides59.2946.0392.37249forward
CNT30309861Sorghum bicolorCamelina sativa40.4827.4279.41170forward
CNT30259840Sorghum bicolorBrassica rapa48.5770.5986.27204forward
CNT30613891Sorghum bicolorArabis alpina42.1443.9280.23177forward
CNT30474628Sorghum bicolorSaccharum spontaneum35.2412.4591.22148forward
CNT30141394Sorghum bicolorLolium perenne58.8138.5395.14247forward
CNT306284Sorghum bicolorZea mays27.6254.2193.1116forward
CNT30610039Sorghum bicolorGossypium raimondii36.4317.3979.74153forward
CNT30720909Sorghum bicolorTriticum spelta59.0537.9893.15248forward
CNT30622400Sorghum bicolorCajanus cajan58.8126.9987.85247forward
CNT30596421Sorghum bicolorOryza meridionalis33.8120.2388.03142forward
CNT30358858Sorghum bicolorLactuca sativa20.4814.8884.8886forward
CNT30644610Sorghum bicolorCannabis sativa41.938.2680.11176forward
CNT30148402Sorghum bicolorBrachypodium distachyon30.4826.0786.72128forward
CNT3099660Sorghum bicolorOryza rufipogon28.5726.4992.5120forward
CNT30585391Sorghum bicolorEchinochloa crusgalli58.8137.9492.31247forward
CNT3051266Sorghum bicolorCucumis sativus58.3332.6779.59245forward
CNT3018856Sorghum bicolorCyanidioschyzon merolae47.6286.9682.5200forward

Expression of CNT30368649

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MSSSVLFWYLRISRSATVPGRKRCGFFTPPVAGADFRAAFVASCFLGALPPVDLRAVCFVRAMAGDWAGEKG

Sequence

>CNT30368649
AGGCACATAAGATAGACGATTTCCATTGACGACAACAAGAGGTTGACAGTTTGACAGACATTGCAGATCACTACACCATTCCTTCCACAAGACCACACCT
ACTACAAGCTACCGAGCAGCGACTGCACCATGACCTATATGGCCGGTCGGTCTTGAAGTCCTGCGCGATCTCGCGGACCAGGCGCTGGAACGGGAGCTTG
CGGATGAGCAGCTCCGTGCTCTTCTGGTACTTGCGGATCTCGCGCAGCGCCACGGTGCCCGGGCGGAAGCGGTGCGGCTTCTTCACGCCGCCGGTAGCCG
GGGCCGACTTCCGCGCCGCCTTCGTCGCCAGCTGCTTCCTCGGCGCCTTGCCGCCGGTGGACTTGCGCGCCGTCTGCTTCGTGCGGGCCATGGCGGGTGA
TTGGGCTGGGGAGAAGGGAG