Detailed information on CNT30368464


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZPP0|TBB1_ELEIN, E-value = 4e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696010Sorghum bicolorOryza sativa10.3430.885.8885forward
CNT30522590Sorghum bicolorSetaria italica40.0219.6894.22329forward
CNT30727960Sorghum bicolorCorchorus capsularis17.0327.9483.57140forward
CNT30488155Sorghum bicolorOlea europaea16.5533.3384.56136forward
CNT30397469Sorghum bicolorTriticum turgidum40.1527.9494.85330forward
CNT30213619Sorghum bicolorHelianthus annuus11.5629.9786.3295forward
CNT30684516Sorghum bicolorTriticum urartu21.1766.1695.4174forward
CNT30621647Sorghum bicolorCajanus cajan10.8338.5386.5289forward
CNT30595970Sorghum bicolorOryza meridionalis12.0422.9791.9299forward

Expression of CNT30368464

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MVPGSSWRSESPAYLPVWSMPCSSQITSQNLAPIWFPHCPPWMWRISLMATEGLGFRRGGGVWGRRGAETAADWWRR

>peptide 2 (48 aa)
GKTENVNIMRSGYSSLILEMSRVPIPEPVPPPSEWQTWNPAVQGRNAS*

Sequence

>CNT30368464
CGGGAAGACAGAGAATGTCAACATCATGCGGTCCGGGTACTCCTCCCTGATCTTGGAGATGAGCAGGGTGCCCATTCCTGAACCAGTACCTCCTCCCAGC
GAGTGGCAGACCTGGAACCCTGCAGTACAAGGGAGAAATGCATCATAATCGATCACTAAGGCTGTCAGGCGTCTACCGCAGCTATCACTGAGAGAGTGAG
AGGTACGAGAATTCTACGAGAAAATCCGCTCAACTCGTCGAAAATGTCACGAGCCGCTTAGATCTAGGCGAAATTGTTCAGATCTACAGGCACAGCGAAA
GAGCAATGGCGCATAAACCCTAGATCCAGGAGGGCTCGTGTCTCCACAACCCCGGAGGGGAAAGGGGGAAAACCATCAGATCCAGTGGGATAGATCAGAT
AGACAAGACATACCTTGTAGGCAGTCGCAGTTCTCGGCCTCCTTGCGCACGACATCGAGCACGGAGTCGATGAGCTCGGCGCCCTCGGTGTAGTGTCCCT
TGGCCCAGTTGTTTCCGGCGCCGGATTGGCCGAAGACGAAGTTGTCGGGGCGGAAGATCTGGCCGAAGGGGCCCGAGCGCACGGAGTCCATGGTCCCCGG
CTCGAGCTGGAGGTCGGAGTCGCCGGCGTACTTGCCGGTGTGGTCGATGCCGTGCTCGTCGCAGATCACCTCCCAGAACTTGGCCCCGATCTGGTTCCCG
CACTGCCCGCCCTGGATGTGGAGGATCTCCCTCATGGCGACGGAGGGGCTAGGGTTCCGGCGAGGCGGTGGGGTTTGGGGGAGGCGGGGCGCGGAGACGG
CGGCGGACTGGTGGAGGAGGAG