Detailed information on CNT30368288


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692506Sorghum bicolorOryza sativa19.2926.3998.6876forward
CNT30664085Sorghum bicolorTriticum dicoccoides49.2462.5885.05194forward
CNT3015504Sorghum bicolorZea mays69.845.4586.18275forward
CNT30369785Sorghum bicolorOryza glumipatula21.5721.7995.2985reverse complement
CNT30100969Sorghum bicolorOryza rufipogon19.2924.9297.3776forward
CNT30115932Sorghum bicolorOryza nivara19.292598.6876forward

Expression of CNT30368288

Peptides detected in this lncRNA

>peptide 1 (69 aa)
DRPHSPSSVAGACDPSGGNKVVWMLCDGFSGPGPVVCLCLLACPSQVGSGWRGSCEGLGLSEPKAAGMA*

Sequence

>CNT30368288
GACCGCCCGCACTCGCCGAGCTCTGTAGCGGGAGCTTGTGACCCGAGCGGGGGCAACAAGGTGGTGTGGATGCTGTGCGACGGTTTCTCTGGGCCTGGGC
CTGTGGTGTGCCTTTGCTTGCTGGCCTGCCCGTCCCAAGTTGGTAGTGGTTGGCGGGGCTCTTGCGAAGGCTTGGGCCTCTCCGAACCTAAAGCGGCAGG
AATGGCGTGAGGCTGGCTTCACAGAGCAGCGATCACTGCCCGCTTCCAACGGTGGGAGGATAACAGGCCGCTGCACCATTAGCCCAACTTAGGGCCCAGA
GCCTCACTATAGCAGACCACCATCTTTTTTTTTTTCTTGGATTGCTGTGTCATTTGGCTAGAGCCCAACTTTGGCCCAATAGCGGAATCTCTCT