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Detailed information on CNT30367865


BLAST search results

BLAST vs Swiss-Prot:
sp|P27923|RS27A_MAIZE, E-value = 2e-74

BLAST vs NONCODE:
NONSTUT000620, E-value = 3e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693922Sorghum bicolorOryza sativa29.2128.3294.3158forward
CNT30178164Sorghum bicolorSecale cereale36.7829.4495.98199forward

Expression of CNT30367865

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSNVMVFPVRVFTKICILAAVGGSPPRCGGGDGGGWVGFGCGGVGG

Sequence

>CNT30367865
TAGGTAGGCGGGTAAAGCAAATCGGCGCAAGCGATTACGCCTTCTGGTTGTAGACATAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGGTCGAAGTGGTT
GGCCATAAAGACGCCGGCGCCGCACTCGGTGTTGGGGCACTCCTTGCGGAGGCGGGTGACCTTGCCGGTGGCGTCGTCCACCTTGTAGAACTGGAGCACG
GCGAGCTTCACCTTCTTGTGCTTGTGCTTGATCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTTCTTGGCGCCACCGCGGAGGGTGCGGCCGTCCT
CGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTC
CACCTCCAACGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGGCGGCGGTTGGGGGGTCGCCTCCGCGCTGCGGCGGCGGCGACGGC
GGCGGCTGGGTAGGGTTTGGGTGCGGCGGGGTGGGGGGTGG