Detailed information on CNT30367388


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XJ39|NLT2A_ORYSJ, E-value = 1e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697724Sorghum bicolorOryza sativa39.1219.2990.85142forward
CNT30676686Sorghum bicolorSetaria viridis57.8554.6985.24210forward
CNT30524241Sorghum bicolorSetaria italica37.7441.3990.51137forward
CNT30555885Sorghum bicolorOryza glaberrima61.1620.484.68222forward
CNT30247616Sorghum bicolorAvena sativa23.428.7384.7185forward
CNT30471439Sorghum bicolorSaccharum spontaneum58.9580.4588.79214forward
CNT30137433Sorghum bicolorLolium perenne24.2413.6987.588forward
CNT30688859Sorghum bicolorTriticum urartu26.7215.6784.5497forward
CNT30578263Sorghum bicolorOryza barthii38.5713.7587.86140forward

Expression of CNT30367388

Peptides detected in this lncRNA

>peptide 1 (74 aa)
LRSYGRVGRTRTYLEQSMEGMLAALPALRPLTRPAALLRQLQAVRLSAVLLAAELRLLTPLQQAAEGAVPVPRA*

Sequence

>CNT30367388
CTTAGATCTTACGGTAGGGTCGGTCGTACTCGTACGTACCTGGAGCAGTCGATGGAGGGGATGCTGGCGGCGTTGCCGGCGTTGAGGCCGCTGACACGTC
CGGCGGCGCTCTTGAGGCAGTTGCAGGCGGTGCGCTTGTCGGCGGTGCTGCTGGCGGCGGAGTTGAGGCTCCTGACGCCGCTGCAGCAGGCCGCGGAGGG
TGCGGTGCCGGTGCCGCGGGCGTAGGCGAGGCAGGGGCTAATCGCGGAGTTCACCTGCCCGCAGGTGACGGCGGCCTCCGACGTCGTCGTCGCCGCTGCC
AGCAGCACCGCGGCCACGACGACGGCGATCATCGCCACAGCAAACTGCATGCTGCGTGCCATG