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Detailed information on CNT30367120


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721822Sorghum bicolorTriticum spelta25.7547.5995.21188forward

Expression of CNT30367120

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MSLAAETMLVRAGLTSAYLRVLRPQSGFTQRMLVSSTASILLTRSAISSVDGILGETWS*

>peptide 2 (54 aa)
MYLIPASAICFQILALRSVATFSRSSAVLFPSQKDSRANLSSLLGPMRGYPTMWD

Sequence

>CNT30367120
TGGGAGTGTACAATTAACCTGAGCGCAAACACAATTAGATATTAACTTCCCGATACGAGATCTTTACCTTGAGTAAGACACACCTCGGAGTGGCAGATGA
AACACTGCAAAGATACCACTCAGTTTTACAATACAAGTACACGGGCAACTTGCCTCTGAACCACCAAATGGAGTAAAACAGGTATTGCCTGGGGCGATCA
TCGAGCCAAGAAAAATACTAATCTAAAAACAGATGGAGCAGAACGGGAACAGGGGACCCTGATTATTGGAAACAAATGGCTTCGATGACACCCTCCTTGT
AATTAAAGGAATAGGCCATGGCGGAGACGACAGTCCTCACTTGGCACTGGCGAGCTGGGTGCGGATGAGCTTGGCAGCAGAGACCATGTTGGTTAGGGCG
GGCTTGACCTCCGCGTACTTACGGGTCTTGAGACCACAGTCAGGGTTCACCCAGAGGATGTTGGTGTCGAGCACCGCAAGCATCTTGTTGACGCGGTCGG
CAATCTCCTCGGTGGACGGGATCCTGGGGGAGACCTGGTCGTAGTAGGAGAAGGTGTTGCTGGGGATGTACTTGATCCCAGCATCAGCCATCTGCTTCCA
GATACTGGCCCTGAGGTCGGTAGCAACCTTCTCAAGATCCTCAGCGGTGCTCTTCCCATCCCAGAAAGACTCAAGGGCAAACTTGAGCTCCCTCTTGGGG
CCCATGCGAGGGTATCCAACAATGTGGGAC