Detailed information on CNT30366487


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30459719Sorghum bicolorSaccharum spontaneum15.6526.6995.5267forward
CNT30687812Sorghum bicolorTriticum urartu10.5120.2793.3345forward

Expression of CNT30366487

Peptides detected in this lncRNA

>peptide 1 (49 aa)
PCSRALIGGAQPYMVGGPPSHSAIKECGGLELEVRGSPCSQTPHRYPKP*

>peptide 2 (39 aa)
ALFSRPDRGRPTLHGWWAPVAQRYKGMWGAGARGTRFTV*

>peptide 3 (50 aa)
MASPANGATANASGSTAAPAPSDGLVYLPFPFCFYGRSYLGHVDVHIIID*

Sequence

>CNT30366487
GGCCTTGTTCTCGCGCCCTGATCGGGGGCGCCCAACCCTACATGGTTGGTGGGCCCCCGTCGCACAGCGCTATAAAGGAATGTGGGGGGCTGGAGCTCGA
GGTACGAGGTTCACCGTGTAGCCAAACTCCCCACCGATATCCTAAACCCTAATCCGATCCGAGAGGGGCGCTGCCAGCGACGGGAAGCACCACCGACGCC
GGCAACACCACCTCGACGTCCGCGCCGTCACCGAGAAACGTCCCCAACGCAGATCCGATGGCTTCACCAGCGAACGGCGCCACTGCTAACGCCAGCGGAT
CTACGGCGGCTCCGGCTCCAAGCGACGGTCTAGTCTATTTACCGTTTCCGTTTTGTTTTTACGGTAGATCTTATTTAGGGCATGTTGATGTACATATTAT
TATTGATTAAATGTAAAGAAATGTTTCC