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Detailed information on CNT3036645


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30626147Cucumis meloDaucus carota15.7446.8282.4125forward

Expression of CNT3036645

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MQQQVHQLNQYKAELLLVFLRLLQLHISLLHKHF*

>peptide 2 (52 aa)
MFSNHHNGIRKLVCFEEFCIWIIVKYNFCFGINCVFYCCKNGCTYEKGSRLL*

Sequence

>CNT3036645
CAATGATATAACAGTCTATTTAGTAGAATCAATAATCAAAAGTGTGATATTATCCAATATGACATTCTTTTTGTCATAGGCAAACTATACTTTTGATGAC
ATAAGTTTGAAAATAAAAACCCTTATCCATTAAAACTTGGGATTTACAACATTGCATTGGGTTTACATATATTAGCTCAAGTAGAAGTACATGGAACACT
CATTCAATAATTAAGCTTTAACAGGCTGTGTAGTAAGACCAAATCCTAATGGGAAAAGAGGATCATAATGTGCATCACCAAAATTCATCGGCAATTGATC
AACACTCTTAAACCAAGTCTGTGAAAGCTTTCCGGTGAACCCATAATCTCCAAATAACACATCGCTAATGCCTTTGCCTTCAGTTCCTGGAAGCCATGCA
GCAACAAGTGCATCAATTGAATCAATATAAGGCTGAATTACTACTGGTCTTCCTGAGATTACTACAACTACACATTTCACTGCTCCACAAACATTTTTGA
TTGTTTCTGGACCAGGCTCAGGAATTGTCAAGTTCAAGCTATCACCATTGGTTTCTGCATATGGATGTTCTCCAACCACCACAATGGCATAAGAAAACTG
GTGTGTTTTGAGGAATTCTGCATTTGGATTATTGTCAAATACAACTTCTGTTTCGGGATCAACTGTGTCTTTTATTGCTGTAAGAACGGTTGTACCTACG
AAAAAGGATCGAGGTTATTGTAGATGACAAAACTATTGACCAATATGTAATGTGGTAAAATTTCACAGGCTATTAGTGTGTCACTGAGTGTCTA