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Detailed information on CNT30366123


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XR61|MTK1_ORYSJ, E-value = 1e-47

BLAST vs NONCODE:
NONORUT004829, E-value = 5e-81

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30101583Sorghum bicolorOryza rufipogon30.257.5984.74190forward
CNT30594470Sorghum bicolorEragrostis curvula38.6984.3890.53243forward

Expression of CNT30366123

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MAIISTKLGNYYSDFNSAASNLSSSSSRTASASLSR*

>peptide 2 (35 aa)
IVRLISMPILCIVCQNQVSKEGSNVITHWPIEPKL*

>peptide 3 (37 aa)
RSLDQHAHSVHSMPKSGFQGRLQCHNPLAHRTQTLNQ*

Sequence

>CNT30366123
ATCGTTCGCTTGATCAGCATGCCCATTCTGTGCATAGTATGCCAAAATCAGGTTTCCAAGGAAGGCTCCAATGTCATAACCCATTGGCCCATAGAACCCA
AACTCTGAATCAATGATTTGAGTTGAACCTGTGGTCACCATGATAGAAGCAGTGTGGAGATCTCCATGAATCAGAGCCTGAGCTCTCTCCATAAACCTGA
AGTTCGAAAACGAATAATTCGTATTTCCCATATATAGAAACAAACCATAGATGGCAATTATTTCTACAAAGTTAGGTAATTATTACAGCGATTTCAATTC
AGCCGCTTCCAACTTGAGCTCCTCATCCTCTCGAACTGCCTCAGCATCTTTGTCAAGATAAGGTGAAGAAGAGCGTCTTGGCCATGTAATCGGACATGTG
GTCGGCGAGCAGCGGGTACTCGACGCCGGCGATGAAGCCCTTGCGGAGGATGATGTGCGGGGGCTCGATGTAACGCATCGCCATCAGCGACATGGCCCGG
TCCAAGTGGTACACCTCGGGGGTGTGCTCCGGGCACAGGCGGCCGTGCTCACGCAGCGTGGAGGCCTCGAAGTAGACGCGCTCCCGCGTCATCGGCCACG
AGTCCCCCACGGAGCGCACGTACGGGAG