Detailed information on CNT30365918


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30243815Sorghum bicolorAvena sativa21.4317.1190.251forward
CNT30463851Sorghum bicolorSaccharum spontaneum21.438.694.1251forward

Expression of CNT30365918

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MGHTGRIRAPSRTRWPHQPRPRRPASVSVSPSPAAAAASSSSRSRTRRRRRTGGTATRRWRGEGRGRGASASWRPRSAE

>peptide 2 (77 aa)
WVTQAGSERRHGHGGLISLGLAGRRACLCLRLLPLPPLRRRLALALVDDGVQAVRRRVGGEEKEGGEELQLHGGPGAR

>peptide 3 (78 aa)
HGSHRQDQSAVTDTVASSASASPAGERVCVSVSCRCRRFVVVSLSHSSTTAYRRYGDASVARRRKGERSFSFMAAPERG

Sequence

>CNT30365918
CATGGGTCACACAGGCAGGATCAGAGCGCCGTCACGGACACGGTGGCCTCATCAGCCTCGGCCTCGCCGGCCGGCGAGCGTGTCTGTGTCTCCGTCTCCT
GCCGCTGCCGCCGCTTCGTCGTCGTCTCGCTCTCGCACTCGTCGACGACGGCGTACAGGCGGTACGGCGACGCGTCGGTGGCGAGGAGAAGGAAGGGGGA
GAGGAGCTTCAGCTTCATGGCGGCCCCGGAGCGCGGAA