Detailed information on CNT30365764


BLAST search results

BLAST vs Swiss-Prot:
sp|P93253|SAHH_MESCR, E-value = 3e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30511017Sorghum bicolorSolanum lycopersicum54.4721.4880.47128forward
CNT30681317Sorghum bicolorTriticum urartu52.7725.3191.13124forward
CNT30720265Sorghum bicolorTriticum spelta59.1551.190.65139forward
CNT30570728Sorghum bicolorVitis vinifera39.5716.6488.1793forward

Expression of CNT30365764

Peptides detected in this lncRNA

>peptide 1 (76 aa)
WLVNEQDGPNSARHAMRPGISTSASSISRRPKSACERSLTLCSRPDEVFSTESAMAAADGEVENWIWAGGTEWEEGR

Sequence

>CNT30365764
CCTGGTTAGTGAATGAGCAGGACGGGCCAAACTCGGCGCGGCACGCCATGAGACCGGGCATCTCGACCTCGGCCAGCTCGATCTCCAGGCGGCCGAAGTC
CGCCTGCGAGAGGTCCTTGACCTTGTGCTCCCGCCCAGACGAGGTCTTCTCCACAGAGAGCGCCATGGCAGCGGCGGACGGAGAAGTCGAGAATTGGATC
TGGGCAGGGGGGACGGAATGGGAGGAGGGGAGGAG