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Detailed information on CNT30365630


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41373|RBS_SACHY, E-value = 3e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30464658Sorghum bicolorSaccharum spontaneum37.7726.6195.49244forward

Expression of CNT30365630

Peptides detected in this lncRNA

>peptide 1 (39 aa)
DRSRWMMPTMDTSAAYIEAKEPTAAKGEKKKKKETKVCV*

Sequence

>CNT30365630
GATCGATCGAGATGGATGATGCCAACAATGGATACATCAGCAGCATATATAGAAGCAAAGGAACCAACAGCAGCAAAAGGTGAAAAAAAGAAGAAGAAAG
AAACCAAGGTGTGTGTGTGACCCCAAGGATGCAAAACCGAACGAACAGGTTGAGAGGCAGCAGCAGGCAGCCATATGCCATTAGCTCACGCAGGAGCTAG
CTAGCAGTTTAATCACTCGCTGCCCGCGGGCTTGTAGGCGATGAAGCTGACGCACTGCGTCTGCTTGATGTTGTCGAAGCCGAGGATCCGGACGTAGGCG
TCCGGGTAGGAGGCGATGGCCTCCTGCAGCTCCTTGTAGACCTGCGACGCGTCGGTGCAGCCGAACATGGGCAGCTTCCACATGGTCCAGTAGCGGCCGT
CGTAGTAGCACGGGGAGCCTTCCTTGCTGAACTCGAGGCAGGGCACCCAGTTGTTGCGCAGCAGGTAGTCCACCTGCTTCAGCAGCTGCTCCTCCGTCAG
CGGCGGCAGGTACGACAGCGTCTCGAACTTCTTGTTCCCGTACGCCGGCCACACCTGCAAATTAATGCATGCATCGATCGATGTACGTGTTTGTGGTTGC
ATTTCGCTAGCTCTGCTGCAAAGAATGAATGAAGATGGCCGGCCGG