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Detailed information on CNT30365562


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF89|CB5_ARATH, E-value = 3e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30353506Sorghum bicolorEragrostis tef46.3418.6793.79177forward

Expression of CNT30365562

Peptides detected in this lncRNA

>peptide 1 (90 aa)
SRSIISEIRMKRILPPLGNLHAWAWHILQTLTYSSAAHDMASMENMASRPFLISFTLRMAAWSGSLAKPSGSKGPPGCSLSSRSSPLMIR*

Sequence

>CNT30365562
GAAGCAGATCAATCATATCAGAGATCAGAATGAAAAGGATTCTTCCCCCTCTTGGTAATTTACACGCATGGGCATGGCACATTCTTCAGACCCTCACATA
CAGCTCAGCAGCGCATGACATGGCGAGCATGGAGAACATGGCGAGCCGGCCGTTCTTGATCTCCTTCACCTTGAGGATGGCGGCCTGGTCGGGGTCACTG
GCCAAGCCCAGCGGGTCGAAGGGCCCACCAGGGTGCAGCTTGTCCTCAAGGTCCAGTCCGTTGATGATCCGGTAGTACTCGGCGCCGCCGACAAGGACGA
CCTCCGCGATCACGGCCACCACCAGGTTGATGGGGATGCTGTTGCCGAAGTAGTTCAGGGTGTTGCCGTCCAGGAGCAGGGC