Detailed information on CNT30365509


BLAST search results

BLAST vs Swiss-Prot:
sp|O23254|GLYC4_ARATH, E-value = 5e-110

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617858Sorghum bicolorSesamum indicum16.1131.782.73110forward
CNT30709157Sorghum bicolorGlycine max37.4840.5787.11256forward
CNT30558965Sorghum bicolorActinidia chinensis33.0967.2683.19226forward
CNT30237993Sorghum bicolorBrassica oleracea40.756.582.01278forward
CNT30248419Sorghum bicolorAvena sativa32.9449.6786.22225forward
CNT30714749Sorghum bicolorMalus domestica golden26.6578.4582.97182forward
CNT30620724Sorghum bicolorCajanus cajan35.4337.6984.3242forward

Expression of CNT30365509

Peptides detected in this lncRNA

>peptide 1 (38 aa)
EIIVINERCTSAATSPLMCAMSQSSRAPTLSAMALSLE*

>peptide 2 (30 aa)
MPSEYLLVKFSEAMSSMPRRWRRFSRSRRS*

Sequence

>CNT30365509
TCGAGATCATTGTTATCAATGAACGTTGTACCTCCGCGGCGACGAGTCCGCTGATGTGCGCCATGTCGCAGAGCAGCAGGGCCCCGACCTTGTCGGCGAT
GGCCCTGAGCCTGGAGTAGTCCCAGTCCCTCGGGTACGCGCTGCCACCGCAGATGATGAGCTTGGGGCGGAAGTCAAGTGCCTTCTCCTCGAGTTTCTCG
TAGTCGATGTACCCGGTGGCGGAGATCTTCTTCCCGCCGGCAGTATAGTAGCCGTGAGTGAGGTGTCCGCCGGAGGGAAGGTCAAGCCCCATGATCCGGT
CGTGCGGGTTGAGCAGCGCGGTGTAAGCGGCGAAGTTGGCGGGGGAGCCCGAGTAGGGCTGCACGTTGACGCCCCAGAACGCGGCGTCGAGGCGGAAGGC
AGCGAGCGCGCGTGACCGGCAGAGGTTCTCGATCTCGTCGATGACGTCGTTGCCGCCGTAGTAGCGGGCACCGGGCATGCCCTCAGAGTACTTGTTGGTG
AAGTTCTCGGAGGCGATGAGCTCGATGCCGCGACGCTGGCGCCGCTTCTCGCGCTCCAGGAGGTCGTAGATCTCCGGGTCGGCGCCGGCGAGCGGGGTTA
GCCCCCATGTGGCGACGGGGTCCATGGCGGCGGCGTGGGAGGGGTTGACAGGACTGGCGGAGGCGAGGAGGGGGCGGGGGGCG