Detailed information on CNT30365250


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696959Sorghum bicolorOryza sativa42.5559.5788.32137forward
CNT307240Sorghum bicolorZea mays62.1149.7593200forward
CNT30721254Sorghum bicolorTriticum spelta33.5419.3985.19108forward

Expression of CNT30365250

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MKPILACIVRGQAVKLYVWDRDLRLTWRSPLASC*

>peptide 2 (29 aa)
MERAPLPETHNSEKDLQEGMPDGCLLRKR*

Sequence

>CNT30365250
AAGATTTTGCTGAATAGTTGAGACATGAAGCCAATTCTTGCTTGTATTGTACGTGGTCAAGCTGTGAAATTGTATGTTTGGGATAGAGATCTGAGACTCA
CTTGGCGAAGTCCTCTGGCTTCTTGCTGAAGAGGGAGACAATCTTCTGAGCCCCCGCGGTGGGCGCTGCGGTGGCGTAGCGGGAGGAGCCGGCGAAGTTG
AGCTGGGTGCCCAGAATCTTCGATGGAGCGAGCGCCATTGCCGGAGACCCACAATTCAGAGAAAGATTTGCAGGAGGGGATGCCTGATGGGTGTTTGTTG
AGGAAAAGGTGAGCTAGTTTAA