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Detailed information on CNT30365238


BLAST search results

BLAST vs Swiss-Prot:
sp|P51082|CHSB_PEA, E-value = 2e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378024Sorghum bicolorArabidopsis thaliana24.3224.3282.09134forward
CNT30680228Sorghum bicolorTriticum urartu28.4933.2685.99157forward
CNT30103826Sorghum bicolorOryza rufipogon36.6629.2389.6202forward

Expression of CNT30365238

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MFTLCDWQQYMENNSSYYDTRQLCRQYRAHYLRYEANNHERSTTGGTRRVHGT*

Sequence

>CNT30365238
TAATAACAACGGTCTTTTATCCGTGAGCTAGCTCGCCCTTAAAATTAAGGTTCTACTACCAGGGCTTACATGCATGTTCACATTGTGCGACTGGCAACAG
TACATGGAAAATAATAGCAGCTACTACGATACACGGCAATTATGCAGACAATACAGAGCACATTATTTGCGTTACGAGGCAAATAATCACGAACGATCGA
CGACTGGTGGGACTCGGAGGGTCCACGGAACGTGACGGCGGTGATCTCGGAGCACACCACCAGGACGCGCGCCCCACGGTTGTTCTCGGCGAGGTCCTTG
GCCACGCGCAGCACCGTGCCGCCCGCGAAGCACCCCTGCTGGTACATCATCAGGCGGTTGACCGAGGGCCGCAGGCCCAGCATCTTGGTGAGCTGGTAGT
CGGCGCCCGGCATCACGGTGGCCGGGCCCGTCGCGCGCTGCGCCTTCCTCACCTCCTCGACGGTCACAGTCGCGGCGGCCATCGTCTCTATCGGATCTTT
CTCTCTACGTTGTACCAGAGAGGCGGCAAGCACGTCGATCGATGGATCGGC