Detailed information on CNT30365159


BLAST search results

BLAST vs Swiss-Prot:
sp|P50249|SAHH_PHASS, E-value = 1e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3096327Sorghum bicolorSolanum tuberosum41.8417.7481.56141forward
CNT30221157Sorghum bicolorHordeum vulgare2743.3382.4291forward
CNT30585997Sorghum bicolorMusa acuminata36.548.6289.43123forward
CNT30659902Sorghum bicolorTriticum dicoccoides59.6465.2688.06201forward
CNT308389Sorghum bicolorZea mays38.8760.0994.66131forward

Expression of CNT30365159

Peptides detected in this lncRNA

>peptide 1 (99 aa)
MAIWMVMWSDPEILAPAKGLDGPNSARHAMRPGISTSASSISRRPKSACERSLTLCSRPDEVFSTESAMAAADGEVENWIWAGGTEWEEGRRRRRWEAGV

Sequence

>CNT30365159
CTGGTTAGTGAATGAGCAGGACATTACAAAGCTAGGATGGCCATCTGGATGGTCATGTGGAGCGACCCAGAGATCCTAGCGCCGGCGAAGGGCTTGGACG
GGCCAAACTCGGCGCGGCACGCCATGAGACCGGGCATCTCGACCTCGGCCAGCTCGATCTCCAGGCGGCCGAAGTCCGCCTGCGAGAGGTCCTTGACCTT
GTGCTCCCGCCCAGACGAGGTCTTCTCCACAGAGAGCGCCATGGCAGCGGCGGACGGAGAAGTCGAGAATTGGATCTGGGCAGGGGGGACGGAATGGGAG
GAGGGGAGGAGACGGCGGCGTTGGGAGGCAGGGGTGA