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Detailed information on CNT30365083


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000426, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383013Sorghum bicolorTriticum turgidum71.2648.7692.811294forward
CNT30240700Sorghum bicolorAvena sativa42.0797.293.19764forward
CNT30445720Sorghum bicolorSaccharum spontaneum71.2660.8496.451294reverse complement
CNT30583270Sorghum bicolorEchinochloa crusgalli71.2657.4996.291294forward

Expression of CNT30365083

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MGKPILRDGVTPADSAISRVARNGIGLRFPEPGRGG*

>peptide 2 (36 aa)
CRDPKDGELCLSGAKPEETLVEARSNTDVRKTNRTI*

>peptide 3 (31 aa)
MEQCRQGKSAKRIRNFGKRIGSEGWARGSQP*

>peptide 4 (33 aa)
MNRKLGYGAKLRANLEPTKGVGRLRQQDGGHGS*

Sequence

>CNT30365083
TGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGAAGCAATACTGATGTGCGAAAGACTAATC
GAACCATCTAGTAGCTGGTTCCCTCTGAAGTTTCCCTCAGGATAGCTGGTGCCCATTACGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGG
CGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCACGGCTGCTCCGGTGAGCCGTGCCATGGAATCGGGAGCTCCAAGTGGGCCATTT
ATTGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCTAGGTTACGGTGCCAAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAG
ACAGCAGGACGGTGGTCATGGAAGTTGAAATCCACTAAGTAGTGTGTAACAACTCACCTGCCGAATCAGCTAGCCCCGAAAATGGATGGCGCTGAAGTGC
GCGACCCACACCCGGCCATCTGGGCGAGCGCCATGCCCCGATGAGTAGGAGGGCGCGGCGGCCGCTGCAAAACCCGGGGCGCGAGCCTGGGCGGAGCGGC
CGTCGTTGCAGATCTTGGTGGTAGCAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGAGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTA
AGCCGATCCTAAGGGACGGGGTAACCCCGGCAGACAGCGCGATTTCGCGTGTTGCCCGAAACGGAATCGGGTTAAGATTTCCCGAGCCGGGACGTGGCGG
TTGACGGCGACGTTAGGAAGTCCAGAGACACCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTACTTAACAGCCTGCCAACCCTGGAATCGGTTTAGCCG
GAGGTAGGGTCCAGCGGTCGGAAGAGCACCGCACATCGCGCGGTGTCCGGTGCGCCACCGGCGGCCCTTGAAAATCCGGAGGACCGAGTACCGTCCACAC
TCGGTCGTACTCATAACCACATCAGGTCTCCAAGGTGAGCAGCCTCTGGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAACGGATCCGTAACTTC
GGGAAAAGGATTGGCTCTGAGGGTTGGGCTCGGGGGTCCCAGCCCTGAACCCGTCGGCTCCCGGCGGACTGCTCGAGCTGCTCACGTGGCGAGAGCGGGC
CGCCGTGTGTCGGCCGGGGGACGGACCGGGAACGGTTCCTTCGGGGGCCTTCCCCGGGCATCGAACAACCGACTCAGAACTGGTACGGACAAGGGGAATC
TGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCCACGGATGCTGACGCAATGTGATTTCTACCCAGTGCTCTGAATACCGTCGTGAGACAGGTTAG
TTTTACCCTACTGATGACCGTGCCGCGATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGTCATCGCGCTTGGTTGCAAAGCCAG
TGGTGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCTAGCAACCGGCGCCTGTGCCCACCGCTCGCCCTGACCCACA
TTAGGGCGTTCGCGCCCCAAGGGCCCGTGCCATTGGCTCAGCCAGCTCGGCCGACGCGCCGTAGCCGGCCGCCTCGAAGCTCCCTTTCTAACGGGCGGCG
GGCTGAATCCTTTGCAGACGACTTAAAACGCGACGGGGCATTATAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATCTTGCCCCACGTCGCAC
GGATTCGTCCCTCCCC