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Detailed information on CNT30365046


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF89|CB5_ARATH, E-value = 2e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697405Sorghum bicolorOryza sativa21.8146.2690210forward
CNT30677042Sorghum bicolorSetaria viridis32.2967.0393.89311forward
CNT30524346Sorghum bicolorSetaria italica35.4147.194.13341forward
CNT30184672Sorghum bicolorSecale cereale14.9543.6487.5144forward
CNT30295002Sorghum bicolorTriticum aestivum25.3447.2989.75244forward
CNT30390869Sorghum bicolorTriticum turgidum16.9334.6888.96163forward
CNT30555388Sorghum bicolorOryza glaberrima14.0226.7994.81135forward
CNT30438779Sorghum bicolorAegilops tauschii20.4631.2286.8197forward
CNT30249379Sorghum bicolorAvena sativa18.6945.3486.67180forward
CNT30662842Sorghum bicolorTriticum dicoccoides20.9836.1487.13202forward
CNT30465769Sorghum bicolorSaccharum spontaneum42.1670.6196.55406forward
CNT30137065Sorghum bicolorLolium perenne21.2944.8690.73205forward
CNT302540Sorghum bicolorZea mays19.7327.0393.68190forward
CNT30353507Sorghum bicolorEragrostis tef21.616.2894.23208forward
CNT30597113Sorghum bicolorOryza meridionalis23.0529.683.33222forward
CNT30371307Sorghum bicolorOryza glumipatula26.2723.3683.79253forward
CNT30151052Sorghum bicolorBrachypodium distachyon11.0145.6988.68106forward
CNT30104243Sorghum bicolorOryza rufipogon17.9632.0488.44173forward
CNT30578126Sorghum bicolorOryza barthii26.2730.0591.7253forward
CNT30581942Sorghum bicolorEchinochloa crusgalli17.7636.7792.4171forward
CNT30117889Sorghum bicolorOryza nivara18.4831.596.07178forward
CNT3039554Sorghum bicolorMarchantia polymorpha12.4632.7988.33120forward

Expression of CNT30365046

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MKRILPPLGNLHAWAWHILQTLTYSSAAHDMASLSSVASVRPHRLGVLSAAPEMTVSRLLPKGSLRCLARFSTGPSPVT*

>peptide 2 (53 aa)
MKKASMENMASRPFLISFTLRMAAWSGSLAKPSGSKGPPGCSLSSRSSPLMIR*

Sequence

>CNT30365046
AAAAGATGGAACCTTAAATGAGGGGACTTAGTAGCATATTTCAGGCACAAAATTAACTAAGTATCATGTCTCAGACGCGCACGAACTAATTAACTTCCAA
AAACTTAAGTAAGTAGCACATCTCAGGCACAAATTGAAGCAGATCAATCATATCAGAGATCAGAATGAAAAGGATTCTTCCCCCTCTTGGTAATTTACAC
GCATGGGCATGGCACATTCTTCAGACCCTCACATACAGCTCAGCAGCGCATGACATGGCATCGCTCTCCAGCGTGGCGTCCGTGCGTCCTCACAGGCTGG
GCGTCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGGTTGTTGCCGAAGGGGTCGCTGAGGTGCTTGGCGAGGTTCTCGACGGGGCCTTCGCCGGTGAC
GTAGGCCTGGATGAAGAAGGCGAGCATGGAGAACATGGCGAGCCGGCCGTTCTTGATCTCCTTCACCTTGAGGATGGCGGCCTGGTCGGGGTCACTGGCC
AAGCCCAGCGGGTCGAAGGGCCCACCAGGGTGCAGCTTGTCCTCAAGGTCCAGTCCGTTGATGATCCGGTAGTACTCGGCGCCGCCGACAAGGACGACCT
CCGCGATCACGGCCACCACCAGGTTGATGGGGATGCTGTTGCCGAAGTAGTTCAGGGTGTTGCCGTCCAGGAGCAGGGCGCCGGTCTGCATCCATTCAGC
CTCTGGGATGACAGCGCCAGCGGCACCGAGCATGGCCCATCTGGCATGGATCAGCTCGTAGGCCTGGTACCTGCACGGCGTTGATGGCTTCTTGCTGAAG
AGGGAGACAATCTTCTGAGCCCCCGCGGTGGGCGCTGCGGTGGCGTAGCGGGAGGAGCCGGCGAAGTTGAGCTGGGTGCCCAGAATCTTCGATGGAGCGA
GCGCCATTGCCGGAGACCCACAATTCAGAGAAAGATTTGCAGGAGGGGATGCCTGATGGGTGT