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Detailed information on CNT30364843


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-92

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30460114Sorghum bicolorSaccharum spontaneum66.3729.8993.53448forward

Expression of CNT30364843

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVLPVKVFTKICIPPLRRSTKWRVLSFWML*

>peptide 2 (31 aa)
MLPYKYFRLTNASMTDHTDTSKTGHGRNKRH*

Sequence

>CNT30364843
CCAACATCACATTTATTTAGAATTAAGCCATATGCTGCCGCACTATAGTTTAGGGTAGAACACAGAGGAACACAACCGGTCCATGAAACGAACTCAGACA
CGACACAGACCATACAAATGCTTCCATACAAATACTTCAGACTGACCAACGCTTCAATGACGGACCATACAGATACTTCAAAGACTGGACATGGCCGAAA
CAAGAGGCACTAGACAACCCAGGTGCGGCAGCAGCTTCAACGACTGATGGCTTACTGACCACCGCGAAGACGGAGCACCAGGTGGAGGGTGCTCTCCTTC
TGGATGTTGTAGTCTGCAAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGGATCT
TAGCCTTCACATTGTCGATGGTGTCAGAGCTCTCAACCTCCAGGGTTATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCATACCACCCCTCAGGCG
GAGCACCAAGTGGAGGGTGCTCTCTTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCC
GGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCTATGGTGTCAGAAGACTCCACCTCAAGGGTG