Detailed information on CNT30364640


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691563Sorghum bicolorOryza sativa2528.2883.5197forward
CNT30340732Sorghum bicolorEragrostis tef36.0835.6285140forward
CNT30100064Sorghum bicolorOryza rufipogon21.9130.9183.5385forward
CNT30575377Sorghum bicolorOryza barthii2544.582.4797forward

Expression of CNT30364640

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MGAMGGFGSSAGPAVYPPALRAISATNGHARSLRG

>peptide 2 (90 aa)
MVSTVAEATVSATRPSRRRKRRPRTLRQPPAPVVPSSWLSATPLAAPAARGWLGPTWGPWVASAARLVLQSTHPRCVRSRPQTGTRARSGG

Sequence

>CNT30364640
ACCTTTGTAGCCGCGGAGGCTGAAGGAGACTAGCGACCAGACTGGCGGCACGAGGAGGTACGCGAGAAGCGCCGCTCCGGCGGTGACGACGTAGCCCTCG
GGGCCCAACGTCGTGATGGTCTCCACGGTCGCCGAGGCGACGGTGTCAGCAACGCGGCCGAGCCGGCGACGGAAGAGGCGGCCACGGACGCTGCGTCAGC
CGCCGGCGCCCGTCGTGCCGAGCTCCTGGCTGTCGGCGACGCCTTTGGCGGCGCCGGCGGCGCGAGGGTGGCTGGGACCGACATGGGGGCCATGGGTGGC
TTCGGCAGCTCGGCTGGTCCTGCAGTCTACCCACCCGCGCTGCGTGCGATCTCGGCCACAAACGGGCACGCGCGCTCGCTCAGGGGGC