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Detailed information on CNT30364562


BLAST search results

BLAST vs Swiss-Prot:
sp|P26302|KPPR_WHEAT, E-value = 4e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691096Sorghum bicolorOryza sativa20.6820.2786.15195forward
CNT30670562Sorghum bicolorSetaria viridis17.9235.5891.12169forward
CNT30513083Sorghum bicolorJuglans regia15.1632.5784.62143forward
CNT30372685Sorghum bicolorArabidopsis thaliana15.4836.2383.56146forward
CNT30708150Sorghum bicolorGlycine max14.8525.8384.29140forward
CNT30565281Sorghum bicolorActinidia chinensis15.831.8480.54149forward
CNT3087966Sorghum bicolorVigna radiata15.1626.1981.12143forward
CNT30552726Sorghum bicolorOryza glaberrima20.6839.2486.67195forward
CNT30145970Sorghum bicolorMedicago truncatula9.3327.4182.9588forward
CNT30686133Sorghum bicolorTriticum urartu13.1549.686.29124forward
CNT30595838Sorghum bicolorOryza meridionalis20.6839.3986.15195forward
CNT30369615Sorghum bicolorOryza glumipatula20.6835.2686.67195forward
CNT30644238Sorghum bicolorCannabis sativa16.9760.1581.25160forward
CNT30575421Sorghum bicolorOryza barthii20.6827.1686.67195forward
CNT30116076Sorghum bicolorOryza nivara20.6827.1686.67195forward
CNT30556275Sorghum bicolorPanicum hallii12.6220.3187.39119forward

Expression of CNT30364562

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MSVLESGFPPLGGTAAPPKTLVSRRMKVLLPHPESAARPITTGLSTEHETWKQLVRAPP*

>peptide 2 (61 aa)
MVVVEADHCGGVTDERVGVRVPALGRHRGATKDAGEPAHEGALAAPGVRRQANHHRLVDGA*

>peptide 3 (49 aa)
MHASLNFGCFRRYTSPLSNNLFIEVPNFQPNDGLEETSSVVASWEVCML*

>peptide 4 (30 aa)
MRPGSSWSVPLRDAFCRRRRRRSSYGCCCW*

>peptide 5 (59 aa)
MTCLCLKPAALETVVVVCALQIAISACVPAAFVLWLSLSSSLQESKPCGWDLKRRREAN*

>peptide 6 (60 aa)
VVGTFILISFNSAMKYGRRYTSKQVKKRLYKTALQGEGFLEISLHVVFLSFCNDISSTSS*

>peptide 7 (86 aa)
MPSAAAAAAAAPTVAAAGEENDLPLSEASCVGDGGGSVRAADRHLCVRAGGVCSLAKLVFFPPRVQALWLGLEEKKRGKLNGMVGVE

Sequence

>CNT30364562
AGTAGTAGGCACTTTTATTTTAATTTCTTTCAATTCTGCAATGAAGTATGGAAGAAGATATACGTCTAAACAAGTGAAGAAGCGATTATATAAGACCGCC
CTCCAAGGAGAGGGATTTCTAGAAATTTCATTGCACGTGGTTTTCCTGAGTTTCTGCAATGACATTTCTTCTACCTCCTCCTAGCTTGCCATATATCCGA
ACTAATTACAAGAAGAGATGTGAAGGTGGTTGTTCTCATTGAGCTTGAAGAGCTGTAGTTTTAGGATAGGAGATCTGAATGCATGCATCATTAAACTTTG
GCTGCTTCCGCCGGTACACCAGCCCTCTCAGCAACAATCTGTTCATAGAGGTCCCTAATTTTCAGCCCAATGATGGTCTGGAAGAGACCAGTTCCGTTGT
TGCTTCCTGGGAAGTCTGCATGCTTTAGCATTTGCTGTGTCACCTCTCCGTAGAACTTGGGAATGGTAGTCGTCGAGGCAGATCACTGTGGTGGTGTCAC
TGATGAGCGTGTTGGAGTCCGGGTTCCCGCCCTTGGGCGGCACCGCGGCGCCACCAAAGACGCTGGTGAGCCGGCGCATGAAGGTGCTCTTGCCGCACCC
GGAGTCCGCCGCCAGGCCAATCACCACCGGCTTGTCGACGGAGCATGAGACCTGGAAGCAGCTGGTCCGTGCCCCTCCGTGATGCCTTCTGCCGCCGCCG
CCGCCGCCGCAGCTCCTACGGTTGCTGCTGCTGGTGAAGAAAATGACTTGCCTCTGTCTGAAGCCAGCTGCGTTGGAGACGGTGGTGGTAGTGTGCGCGC
TGCAGATCGCCATCTCTGCGTGCGTGCCGGCGGCGTTTGTTCTTTGGCTAAGCTTGTCTTCTTCCCTCCAAGAGTCCAAGCCTTGTGGCTGGGACTTGAA
GAGAAGAAGAGAGGCAAACTGAATGGGATGGTGGGTGTGGAGC