Detailed information on CNT30364526


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519956Sorghum bicolorSetaria italica53.2921.7987.65243forward
CNT30254744Sorghum bicolorAvena sativa28.2918.8983.72129forward
CNT30344501Sorghum bicolorEragrostis tef23.912.4387.16109forward
CNT30603706Sorghum bicolorOryza punctata28.298.5182.95129forward

Expression of CNT30364526

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MRRGRTPSSSSAPRRAPVARSGQWSRERAGQPPRLAPRGA

>peptide 2 (83 aa)
MRRRHRRPRVASDSARRRKKAGMGSELGSGAAAENAGPAYTAALDAAGADTILFVGTTAGACGPIRPVEQRTRWSTAAASATGG

Sequence

>CNT30364526
TAAGCTGATAATAGATACAAACTTGACATCTTACATAAGAGAAGAACCTTCACCTGACCTACTAAACATCACATAACTTTAGTTCATGACTCACCTAACA
CAAAACTCACACAGATCAAACGCACACCAAACCTTAGATTATTGCAACGATAAACTACCCTGAATTATAATCAGAACGTCAGCCGTGTCAGGCGAGCTCG
CCGATGCGGAGGAGGCACCGGAGGCCCCGGGTGGCCTCGGACTCCGCGCGCCGGAGGAAGAAGGCGGGCATGGGGAGTGAACTCGGCTCGGGCGCCGCGG
CAGAAAACGCCGGGCCGGCGTACACGGCCGCGCTGGATGCGGCGGGGGCGGACACCATCCTCTTCGTCGGCACCACGGCGGGCGCCTGTGGCCCGATCCG
GCCAGTGGAGCAGAGAACGCGCTGGTCAACCGCCGCGGCTAGCGCCACGGGGGGCA