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Detailed information on CNT30364370


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30495795Sorghum bicolorDigitaria exilis27.113.7688.05226forward

Expression of CNT30364370

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MRRRHRRPRVASDSARRRKKAGMGSELGSGAAAENAGPAYTAALDAAGADTILFVGTTAGACGPIRPVEQRTRWSTAAASATGG

>peptide 2 (39 aa)
MRRGRTPSSSSAPRRAPVARSGQWSRERAGQPPRLAPRGA

Sequence

>CNT30364370
TAAGCTGATAATAGATACAAACTTGACATCTTACATAAGAGAAGAACCTTCACCTGACCTACTAAACATCACATAACTTTAGTTCATGACTCACCTAACA
CAAAACTCACACAGATCAAACGCACACCAAACCTTAGATTATTGCAACGATAAACTACCCTGAATTATAATCAGGTCGTCTACTTAAGATCACCTAAACC
AAACAGCTATTTCAGACACTAATTTAATCCATCCCCTGAACCAAACACCACCACCACCATCACTAGAACACCTAGAAGCCAAGCTCCAAGCTACTGTAGA
ACCAAGCAGCCAACAGCTAGCTACCCAATCTAGCAGCCATCCTTCCTTTCTTACTCATAGTTATTCTTCTAACCTAGAGACATCAGCTTTCCATTGAAGC
GAACCGAACTGCAAGCGATATGTGAACCTAACCGAAGTCCGCCACCAAATCCAACCACCGGAAGCCCGTTGGCCAACCTTTCCTCTGAAAAAATACCGGA
AGAGACGAAGCCGAAGGGGTGAACGAAGTAGTAGACAGAGGCTGGTCGAGAGAACGTCAGCCGTGTCAGGCGAGCTCGCCGATGCGGAGGAGGCACCGGA
GGCCCCGGGTGGCCTCGGACTCCGCGCGCCGGAGGAAGAAGGCGGGCATGGGGAGTGAACTCGGCTCGGGCGCCGCGGCAGAAAACGCCGGGCCGGCGTA
CACGGCCGCGCTGGATGCGGCGGGGGCGGACACCATCCTCTTCGTCGGCACCACGGCGGGCGCCTGTGGCCCGATCCGGCCAGTGGAGCAGAGAACGCGC
TGGTCAACCGCCGCGGCTAGCGCCACGGGGGGCA