Detailed information on CNT30364323


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003894, E-value = 1e-145

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710098Sorghum bicolorGlycine max50.1457.6491.71181forward
CNT3082954Sorghum bicolorBrassica juncea54.0216.5390.77195reverse complement

Expression of CNT30364323

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MFSLLKPTFSLPLRRPPLSRLLPSKAERSPTDAF*

Sequence

>CNT30364323
ACACAGGGTCACCTTGTGTCCTTAAACCTATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCCGTACCAACAAGGTCTGATCTTAGGCCCTGAC
TCACCCTCCGTGGACGAACCTTGCGGAGGAAACCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCGACATTCTCGCTTCCG
CTTCGTCGACCCCCGCTTTCGCGTTTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTGACATCCCACAGCTTCGGCAGATCGCTTAGCCC
CGTTCATCTTCAGCGCAAGGGCGCTCGATCAGTGAGCTATTACGCACTCTTTAAATCCACT