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Detailed information on CNT30364256


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640933Sorghum bicolorNymphaea colorata27.8417.6981.48135forward
CNT30618033Sorghum bicolorSesamum indicum24.5414.7384.03119forward

Expression of CNT30364256

Peptides detected in this lncRNA

>peptide 1 (76 aa)
KKIKASFSSCLSIIIMPDHTITQQKHDDEIIRDTNSDSSTQTTSQITDSTPSYSERGRGRELNRSMEGGGGRTTSR*

>peptide 2 (84 aa)
MTNDGGRRRQARHLSDLAAVGDLDLLSGGPTARPNLLNRLDDIHPLHNLPKHDVFPVEPGRRHGADEELGAVGVGPSVGHGQHPG

Sequence

>CNT30364256
ACAAGAAAATTAAAGCAAGTTTCAGCAGTTGTCTTAGCATAATCATCATGCCCGATCACACCATTACACAGCAGAAACACGACGACGAAATAATTAGGGA
CACAAATTCAGACTCAAGTACTCAAACCACCTCTCAGATCACCGACAGTACGCCATCTTATTCAGAGCGAGGAAGGGGAAGGGAATTGAACAGGAGCATG
GAAGGAGGAGGGGGGAGGACGACGAGCCGATGACGAACGACGGAGGGCGGCGGCGGCAAGCTCGACACCTATCAGATCTGGCCGCAGTTGGCGATCTTGA
CCTCCTTAGCGGTGGACCCACTGCGAGACCCAACCTTCTCAATCGCCTTGACGACATCCATCCCCTCCACAACCTGCCCAAACACGACGTGTTTCCCGTC
GAGCCAGGGCGTCGGCACGGTGCAGATGAAGAACTGGGAGCCGTTGGTGTTGGGCCCAGCGTTGGCCATGGACAGCACCCCGGGC