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Detailed information on CNT30364121


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690617Sorghum bicolorOryza sativa25.9914.2491.81171forward
CNT30522968Sorghum bicolorSetaria italica34.1916.7493.33225forward
CNT30293057Sorghum bicolorTriticum aestivum26.4420.6987.93174forward
CNT30437732Sorghum bicolorAegilops tauschii25.9924.8990.06171forward
CNT3014485Sorghum bicolorZea mays15.0547.695.9699forward
CNT30339116Sorghum bicolorEragrostis tef27.225.1188.83179forward
CNT3099938Sorghum bicolorOryza rufipogon25.9916.1391.81171forward

Expression of CNT30364121

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSPISSPPTAPPSSPAPSPMPKLFFFFCGFTACCWYPYPAACCGG*

>peptide 2 (37 aa)
LILTIRLRTKRNKQITNANPKRKTSALEMLGVIIRVL*

Sequence

>CNT30364121
TTGATCCTGACAATTAGATTGCGTACAAAACGAAACAAACAAATCACAAACGCAAATCCAAAACGAAAGACCTCTGCCCTTGAGATGCTCGGTGTCATCA
TCAGAGTGCTCTAGAAATCAAAGCCGCCATCGAAGCCACCGCCGTCGTCGAACCCGGCGTCGTAGCCGGCATCGTACGCCGACGCGTCCGACATCATGTC
GCCGATCAGCAGCCCCCCGACGGCGCCACCGAGCAGCCCGGCCCCGAGCCCCATGCCGAAGTTGTTCTTCTTCTTCTGCGGCTTCACGGCCTGCTGCTGG
TACCCGTACCCGGCGGCCTGCTGCGGCGGGTAGCCGTACCCGTACCCAGCCTGCGGCGGCGGGAGGCGCGTACGCGTCAGCCTTACCGGACGGCGGCGGG
TACGCAGAGGGAGGCGGGTACGCGGCGGCCTGGGTGTATGCGGACTGGGCGGGGGCGTAGCCGTTGGCGGCGGCCGCGGACCGAGTGACCTCGCCGAGCT
TGTACGACAGGTTGAGGACTCCCTGGGGCTTGCCAGAGGAGATCTTGCGGACCTGGTAGGCGACGAACTTGGCGGGGACGGGGCCGTCGGAGGCGCCGGA
GAGGAGCTCGGAGAGCGGGATGTGGACCTCGCCGACGTCGCGGTCGCCGAGGGCGCGC