Detailed information on CNT3036405


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021413Cucumis meloCitrullus lanatus36.3442.0989.7165forward
CNT3049669Cucumis meloCucumis sativus44.7165.791.13203forward

Expression of CNT3036405

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MHTISTRTQSPLKKIRAVFAAAAAHLQVQSRIHSFHHSKTFSTMNNEEQKELKVCLVIRV*

Sequence

>CNT3036405
AAACTCTGTAACTTCTCATAAATTAGCACATACTATTTCTTAAATTTCTTACAGAGGGCGAAGCAAATACTAAACAGACATGGATGAACACGGGATTAAA
GAGCTAAAAACATCACCGACTGAACCTTATAACAGCATATAAAGTTTTTCCACAACTCCATGACTGCTATTATTCAACGGAACGCTACAATCGACACTTA
AAAAGACGCAACACAACAGAGAACGAAAACGCTTGGAGGTTTTATAATTGTTATTAAGAAGGATGCATACTATTAGTACTCGAACACAATCTCCACTTAA
GAAGATTCGAGCTGTTTTTGCTGCTGCTGCTGCTCATTTACAGGTGCAGAGCCGCATCCACAGTTTCCACCACAGCAAGACATTTTCGACAATGAATAAC
GAAGAACAAAAAGAATTGAAAGTTTGTTTGGTAATCAGAGTATAACTTATAGCG