Detailed information on CNT30363920


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8LR63|FLP2_ORYSJ, E-value = 1e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30682213Sorghum bicolorTriticum urartu20.789.0790.1101forward

Expression of CNT30363920

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNCSDAAARQELTTKTIDGGEVRLWYCSRPPPPLSA*

>peptide 2 (37 aa)
MEERCACGTAAGRRRRCRRSSAPSRAPPACAPATRRT*

Sequence

>CNT30363920
TGAGCAAGTAGATAGACGCAACAAATTAATTAGGGTACAAACAAAGGCTAGCCAGCTAGCTATATAGGTAGCAGACGATCGAGATGAACTGCAGTGATGC
AGCAGCCAGGCAGGAATTAACAACGAAGACGATAGATGGAGGAGAGGTGCGCTTGTGGTACTGCAGCAGGCCGCCGCCGCCGTTGTCGGCGTAGTAGCGC
TCCCAGCCGAGCGCCGCCAGCTTGCGCTCCAGCGACGCGTAGGACGTGACCACCTCCCCGGAGGGCGTGTGCAGCAGCGCCTTGCGCTTGCCCGACGCCG
CCGCCGCGTTCCCCGACGTCGGGTTCTCCACCAGCCTCACCACGCCGTTCCGGAACACCCACACGCCCGACATACTTGCTGGGTGCGTGGCCTCTCCCCT
CCTCTGCTTTTCCTCCCTCTTCGATCGATCCCTGCGGATGATGGAGGAGTCTTGTATAGTAGCTAGCTAGCTAGGTTGTCCGGTGC