Detailed information on CNT30363557


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT002444, E-value = 2e-180

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616920Sorghum bicolorSesamum indicum96.9335.5289.91347forward

Expression of CNT30363557

Peptides detected in this lncRNA

>peptide 1 (60 aa)
ILGLTHPPWTNLAEETLGFRGIGFSPMFLLLKPTFSLPLCRPPLSRLLPSKAERSPTDAF*

>peptide 2 (50 aa)
HLRPDSPSVDEPCGGNLGFSGHWILTNVFVTQADILASALSTPAFAFASL*

Sequence

>CNT30363557
CATCTTAGGCCTGACTCACCCTCCGTGGACGAACCTTGCGGAGGAAACCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTTGTTACTCAAGCCG
ACATTCTCGCTTCCGCTTTGTCGACCCCCGCTTTCGCGTTTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTGACATCCCACAGCTTCGG
CAGATCGCTTAGCCCCGTTCATCTTCAGCGCAAGGGCGCTCGATCAGTGAGCTATTACGCACTCTTTAAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGC
TGTCTTTGCACCCCCACCTCCTTTATCACTGAGCGGTCATTTAGGGGGTGGGGGAAAT