Detailed information on CNT30363226


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674545Sorghum bicolorSetaria viridis25.2619.3486.8799forward
CNT30594881Sorghum bicolorEragrostis curvula20.6621.9591.3681forward

Expression of CNT30363226

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MEQPVTDQTHIQEQEQQQQQQCLQQVSAEPEEDTARRHTVFFMSNLASQS*

>peptide 2 (58 aa)
MLAAGISRARGRYSTETHSLLHVQFGFPILSGCLVELEGLHHLPGEVGVVTAKVAETTP

>peptide 3 (32 aa)
EKGKKKKYWTTKLKDKDQRIILVAATPNYTNP*

Sequence

>CNT30363226
CGAAAAGGGGAAGAAAAAAAAATACTGGACGACCAAACTAAAAGATAAAGATCAGCGCATAATCCTGGTTGCTGCCACACCAAATTATACCAATCCCTAA
GCCGGCGGCGCCGACATGGCTTGCTTGCCAAAGCCTTCTTTTCTTCTCTTCTATGGAGCAGCCAGTCACTGATCAAACACACATCCAGGAGCAGGAGCAG
CAGCAGCAGCAGCAATGCTTGCAGCAGGTATCAGCAGAGCCAGAGGAAGATACAGCACGGAGACACACAGTCTTCTTCATGTCCAATTTGGCTTCCCAAT
CTTAAGCGGATGCCTTGTCGAACTTGAGGGGCTTCACCACCTCCCAGGTGAAGTCGGCGTCGTCACGGCCAAAGTGGCCGAGACGACGCCGA